miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39381_pab-MIR396c:mirbase
          Length = 143

 Score =  139 bits (70), Expect = 5e-34
 Identities = 94/102 (92%)
 Strand = Plus / Minus

                                                                       
Query: 11  ttcccacggctttcttgagcttcttatgcggatctgttggcggtgagattgaccgccaac 70
           ||||||||||||||||||||||| |||||||||||||| |||||| |||    |||||||
Sbjct: 118 ttcccacggctttcttgagcttcgtatgcggatctgttagcggtgcgatctgtcgccaac 59

                                                     
Query: 71  actgccgatcgggaagttcaagaaagccgtggaaaaatatga 112
           ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 58  actcccgatcgggaagttcaagaaagccgtggaaaaatatga 17




>39878_aly-MIR396b:mirbase
          Length = 188

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 84  aagttcaagaaagccgtggaaaaatatgac 113
           |||||||||||||| |||||||||||||||
Sbjct: 52  aagttcaagaaagctgtggaaaaatatgac 23



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 10  tttcccacggctttcttgagcttctt 35
           |||||||| |||||||||||||||||
Sbjct: 155 tttcccacagctttcttgagcttctt 130




>39380_pab-MIR396b:mirbase
          Length = 116

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 90/111 (81%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                       
Query: 6   ataatttcccacggctttcttgagcttcttatgcggatctgttggcggtgagattgaccg 65
           ||||||||||||||||||||||| ||| | |  ||||||||||  || || ||| | |||
Sbjct: 111 ataatttcccacggctttcttgatcttgtcacccggatctgttatcgatgcgatcggccg 52

                                                              
Query: 66  ccaacactgccgatcgggaagt----tcaagaaagccgtggaaaaatatga 112
           ||||||   | ||||| |||||    ||||||||||||||||||| |||||
Sbjct: 51  ccaacagacctgatcgtgaagtaagttcaagaaagccgtggaaaactatga 1




>41243_csi-MIR396c:mirbase
          Length = 178

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 83  gaagttcaagaaagccgtggaaaaatatgaca 114
           ||||||||||||||| ||||||||| ||||||
Sbjct: 34  gaagttcaagaaagctgtggaaaaacatgaca 3




>41142_tcc-MIR396e:mirbase
          Length = 146

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||||||||||||
Sbjct: 103 gaagttcaagaaagccgtggaaaa 126




>41141_tcc-MIR396d:mirbase
          Length = 182

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 10  tttcccacggctttcttgagcttc 33
           ||||||||||||||||||||||||
Sbjct: 162 tttcccacggctttcttgagcttc 139



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 84  aagttcaagaaagccgtggaaaa 106
           |||||||||||||||||||||||
Sbjct: 41  aagttcaagaaagccgtggaaaa 19




>41441_ptc-MIR396g:mirbase
          Length = 168

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 84  aagttcaagaaagccgtggaaaa 106
           |||||||||||||||||||||||
Sbjct: 31  aagttcaagaaagccgtggaaaa 9



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 10  tttcccacggctttcttgagctt 32
           |||||||||||||||||||||||
Sbjct: 162 tttcccacggctttcttgagctt 140



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  tcaagaaagccgtggaaaaatatga 112
           ||||||||||||||| |||||||||
Sbjct: 144 tcaagaaagccgtgggaaaatatga 168




>39426_pta-MIR396:mirbase
          Length = 119

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 84  aagttcaagaaagccgtggaaaaatatgaca 114
           |||||||||||||| |||||||| |||||||
Sbjct: 37  aagttcaagaaagctgtggaaaagtatgaca 7




>41440_ptc-MIR396f:mirbase
          Length = 127

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 85  agttcaagaaagccgtggaaaa 106
           ||||||||||||||||||||||
Sbjct: 30  agttcaagaaagccgtggaaaa 9




>41438_ptc-MIR396d:mirbase
          Length = 154

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 12  tcccacggctttcttgagcttc 33
           ||||||||||||||||||||||
Sbjct: 146 tcccacggctttcttgagcttc 125



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 82  ggaagttcaagaaagccgtggaaaa 106
           |||||||||||||||| ||||||||
Sbjct: 33  ggaagttcaagaaagctgtggaaaa 9




>41437_ptc-MIR396c:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 82  ggaagttcaagaaagccgtggaaaaa 107
           |||||||||||||||| |||||||||
Sbjct: 33  ggaagttcaagaaagctgtggaaaaa 8



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 83  gaagttcaagaaagccgtggaa 104
           ||||||||||||||||||||||
Sbjct: 73  gaagttcaagaaagccgtggaa 94




>40086_ath-MIR396b:mirbase
          Length = 135

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 84  aagttcaagaaagccgtggaaaaatatgac 113
           |||||||||||||| |||||||| ||||||
Sbjct: 31  aagttcaagaaagctgtggaaaagtatgac 2



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  tttcccacggctttcttgagcttc 33
           |||||||| |||||||||||||||
Sbjct: 127 tttcccacagctttcttgagcttc 104




>42811_zma-MIR396e:mirbase
          Length = 166

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 11  ttcccacggctttcttgagcttctt 35
           |||||||||||||||||| ||||||
Sbjct: 164 ttcccacggctttcttgaccttctt 140




>41795_bdi-MIR396e:mirbase
          Length = 201

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 81  gggaagttcaagaaagccgtggaaa 105
           ||||||||||||||||| |||||||
Sbjct: 55  gggaagttcaagaaagctgtggaaa 31




>41242_csi-MIR396b:mirbase
          Length = 134

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 85  agttcaagaaagccgtggaaaaata 109
           ||||||||||||| |||||||||||
Sbjct: 39  agttcaagaaagctgtggaaaaata 15




>41212_ccl-MIR396:mirbase
          Length = 277

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 82  ggaagttcaagaaagccgtggaaaa 106
           |||||||||||||||| ||||||||
Sbjct: 165 ggaagttcaagaaagctgtggaaaa 141




>39741_smo-MIR396:mirbase
          Length = 168

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  gttcaagaaagccgtggaaaa 106
           |||||||||||||||||||||
Sbjct: 29  gttcaagaaagccgtggaaaa 9




>41661_vvi-MIR396b:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 35  gaagttcaagaaagctgtggaaaa 12




>41439_ptc-MIR396e:mirbase
          Length = 145

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 32  gaagttcaagaaagctgtggaaaa 9




>41140_tcc-MIR396c:mirbase
          Length = 152

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  tttcccacggctttcttgagcttc 33
           |||||||| |||||||||||||||
Sbjct: 132 tttcccacagctttcttgagcttc 109




>40726_mtr-MIR396a:mirbase
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 27  gaagttcaagaaagctgtggaaaa 4




>40476_gma-MIR396d:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 32  gaagttcaagaaagctgtggaaaa 9




>40475_gma-MIR396c:mirbase
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 42  gaagttcaagaaagctgtggaaaa 19




>40474_gma-MIR396b:mirbase
          Length = 126

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 42  gaagttcaagaaagctgtggaaaa 19




>40379_rco-MIR396:mirbase
          Length = 124

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  gaagttcaagaaagccgtggaaaa 106
           ||||||||||||||| ||||||||
Sbjct: 27  gaagttcaagaaagctgtggaaaa 4