miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39390_pab-MIR950:mirbase
Length = 438
Score = 157 bits (79), Expect = 2e-39
Identities = 100/107 (93%)
Strand = Plus / Plus
Query: 9 gaaagaggtttggaaggtgatcttaacatctgggccacgatggtttattgttcatcgtgt 68
||||||||||| | |||||||||| |||||||||||||||||||||||| ||| |||| |
Sbjct: 46 gaaagaggttttggaggtgatcttcacatctgggccacgatggtttatttttcttcgttt 105
Query: 69 atttatcataaaccatggtgccccagatgataagagcaccttcgcct 115
|||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 106 atttatcataaaccatggtgccccagatgagaagagcaccttcgcct 152
>39389_pab-MIR950:mirbase
Length = 438
Score = 157 bits (79), Expect = 2e-39
Identities = 100/107 (93%)
Strand = Plus / Plus
Query: 9 gaaagaggtttggaaggtgatcttaacatctgggccacgatggtttattgttcatcgtgt 68
||||||||||| | |||||||||| |||||||||||||||||||||||| ||| |||| |
Sbjct: 46 gaaagaggttttggaggtgatcttcacatctgggccacgatggtttatttttcttcgttt 105
Query: 69 atttatcataaaccatggtgccccagatgataagagcaccttcgcct 115
|||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 106 atttatcataaaccatggtgccccagatgagaagagcaccttcgcct 152
>39440_pta-MIR950b:mirbase
Length = 92
Score = 60.0 bits (30), Expect = 4e-10
Identities = 75/90 (83%)
Strand = Plus / Plus
Query: 20 ggaaggtgatcttaacatctgggccacgatggtttattgttcatcgtgtatttatcataa 79
||||||||||||| ||||| || || || |||||||||| ||||||| | |||| ||||
Sbjct: 1 ggaaggtgatctttacatcaggtcctcggtggtttattgctcatcgtttgtttacgataa 60
Query: 80 accatggtgccccagatgataagagcacct 109
||||| ||| ||||||| ||||||||||
Sbjct: 61 accatcgtggagcagatgaaaagagcacct 90
>39439_pta-MIR950a:mirbase
Length = 92
Score = 60.0 bits (30), Expect = 4e-10
Identities = 75/90 (83%)
Strand = Plus / Plus
Query: 20 ggaaggtgatcttaacatctgggccacgatggtttattgttcatcgtgtatttatcataa 79
||||||||||||| ||||| || || || |||||||||| ||||||| | ||||| ||||
Sbjct: 1 ggaaggtgatctttacatcaggtcctcggtggtttattgctcatcgtttgtttataataa 60
Query: 80 accatggtgccccagatgataagagcacct 109
||||| ||| | ||||| ||||||||||
Sbjct: 61 accatcgtggagccgatgaaaagagcacct 90
