miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39391_pab-MIR951:mirbase
Length = 108
Score = 208 bits (105), Expect = 6e-55
Identities = 105/105 (100%)
Strand = Plus / Minus
Query: 1 gaaagcaaaggtgttcttgacgactggaccgcgatagttgatgggatattactgcaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gaaagcaaaggtgttcttgacgactggaccgcgatagttgatgggatattactgcaaatc 48
Query: 61 ttaaagcaaaccacgtggtccagacgtcaagaacaccttcgcttc 105
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 ttaaagcaaaccacgtggtccagacgtcaagaacaccttcgcttc 3
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 3 aagcaaaggtgttcttgacgactggacc 30
|||| ||||||||||||||| |||||||
Sbjct: 4 aagcgaaggtgttcttgacgtctggacc 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 77 ggtccagacgtcaagaacaccttcgctt 104
||||||| ||||||||||||||| ||||
Sbjct: 78 ggtccagtcgtcaagaacacctttgctt 105
>39441_pta-MIR951:mirbase
Length = 105
Score = 65.9 bits (33), Expect = 5e-12
Identities = 88/105 (83%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 2 aaagcaaaggtgttcttgacgactggaccgcgatagttgatgggatattactgcaaatct 61
||||||||||||||||||| ||||| |||||| ||| |||| | | || ||| | |
Sbjct: 105 aaagcaaaggtgttcttgatgactgaaccgcggtagatgattgtttcttcatgcccaacg 46
Query: 62 taaagcaaacca-cgtggtccagacgtcaagaacaccttcgcttc 105
||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 45 taaagcaaaccctcgtggtccagacgtcaagaacaccatcgcttc 1
