miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39378_pab-MIR395:mirbase
Length = 103
Score = 163 bits (82), Expect = 2e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 ctcaatgccgggagttccttcaatcacttcgccgaatccgaaagcatttcactgaagtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 ctcaatgccgggagttccttcaatcacttcgccgaatccgaaagcatttcactgaagtgt 73
Query: 61 ttggaggaacttcgggcgtcac 82
||||||||||||||||||||||
Sbjct: 74 ttggaggaacttcgggcgtcac 95
>39876_aly-MIR395i:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 actgaagtgtttggaggaact 71
|||||||||||||||||||||
Sbjct: 62 actgaagtgtttggaggaact 82
>42803_zma-MIR395m:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 53 tgaagtgtttggaggaact 71
|||||||||||||||||||
Sbjct: 62 tgaagtgtttggaggaact 80
>42802_zma-MIR395l:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 53 tgaagtgtttggaggaact 71
|||||||||||||||||||
Sbjct: 61 tgaagtgtttggaggaact 79
>42793_zma-MIR395c:mirbase
Length = 138
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 53 tgaagtgtttggaggaact 71
|||||||||||||||||||
Sbjct: 100 tgaagtgtttggaggaact 118
>42580_sbi-MIR395k:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 53 tgaagtgtttggaggaact 71
|||||||||||||||||||
Sbjct: 61 tgaagtgtttggaggaact 79
>42015_osa-MIR395o:mirbase
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 53 tgaagtgtttggaggaact 71
|||||||||||||||||||
Sbjct: 50 tgaagtgtttggaggaact 68
>42003_osa-MIR395c:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 53 tgaagtgtttggaggaact 71
|||||||||||||||||||
Sbjct: 60 tgaagtgtttggaggaact 78
>41430_ptc-MIR395f:mirbase
Length = 113
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 tcactgaagtgtttggaggaact 71
|||||||||||||||| ||||||
Sbjct: 81 tcactgaagtgtttgggggaact 103
>41429_ptc-MIR395e:mirbase
Length = 113
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 tcactgaagtgtttggaggaact 71
|||||||||||||||| ||||||
Sbjct: 81 tcactgaagtgtttgggggaact 103
