miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39384_pab-MIR482b:mirbase
Length = 121
Score = 228 bits (115), Expect = 7e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 1 atgtggatggaagtcttgaggattgggaggataggagaaggctgtttgcttaattctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtggatggaagtcttgaggattgggaggataggagaaggctgtttgcttaattctcag 60
Query: 61 ttgaaacctgattagtcttccctattcctcccattcctattgcctccatcacaca 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaaacctgattagtcttccctattcctcccattcctattgcctccatcacaca 115
>39383_pab-MIR482a:mirbase
Length = 118
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 74 agtcttccctattcctcccattcctattgcctccatcaca 113
||||||||||| ||||||||||||| |||||| |||||||
Sbjct: 76 agtcttccctactcctcccattcctgttgccttcatcaca 115
>39431_pta-MIR482c:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 agtcttccctattcctcccattcct 98
|||||||||||||||||||||||||
Sbjct: 56 agtcttccctattcctcccattcct 80
>39385_pab-MIR482c:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 tgtggatggaagtcttgaggattgggag 29
||||||||||||||||||||| ||||||
Sbjct: 23 tgtggatggaagtcttgaggagtgggag 50
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 74 agtcttccctattcctcccattcctattgcctccatcacaca 115
|||||| |||| ||||||||||||||||| || || ||||||
Sbjct: 83 agtctttcctactcctcccattcctattggcttcaccacaca 124
>41687_vvi-MIR482:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 73 tagtcttccctattcctcccattcctattg 102
||||||| |||| |||||||||||||||||
Sbjct: 83 tagtctttcctactcctcccattcctattg 112
>41259_csi-MIR482a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 76 tcttccctattcctcccattcctat 100
|||||||||| ||||||||||||||
Sbjct: 98 tcttccctatgcctcccattcctat 122
>39430_pta-MIR482b:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 74 agtcttccctattcctcccattcct 98
||||||||||| |||||||||||||
Sbjct: 67 agtcttccctactcctcccattcct 91
>39429_pta-MIR482a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 74 agtcttccctattcctcccattcct 98
||||||||||| |||||||||||||
Sbjct: 67 agtcttccctactcctcccattcct 91
