miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39379_pab-MIR396a:mirbase
          Length = 100

 Score =  198 bits (100), Expect = 6e-52
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 7   aatcccgccatgctcttccacagctttcttgaactaagagtcgatcggatccggtcagtt 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aatcccgccatgctcttccacagctttcttgaactaagagtcgatcggatccggtcagtt 60

                                                   
Query: 67  cagagctcaagaaagctgtgggaaaacatgggcggattcg 106
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cagagctcaagaaagctgtgggaaaacatgggcggattcg 100




>41140_tcc-MIR396c:mirbase
          Length = 152

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 70  agctcaagaaagctgtgggaaaacatgg 97
           ||||||||||||||||||||||||||||
Sbjct: 111 agctcaagaaagctgtgggaaaacatgg 138



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 13 gccatgctcttccacagctttcttgaact 41
          |||||||| ||||||||||||||||||||
Sbjct: 12 gccatgcttttccacagctttcttgaact 40




>40086_ath-MIR396b:mirbase
          Length = 135

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 70  agctcaagaaagctgtgggaaaacatg 96
           |||||||||||||||||||||||||||
Sbjct: 106 agctcaagaaagctgtgggaaaacatg 132



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 ttccacagctttcttgaact 41
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>39878_aly-MIR396b:mirbase
          Length = 188

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 70  agctcaagaaagctgtgggaaaacatg 96
           |||||||||||||||||||||||||||
Sbjct: 134 agctcaagaaagctgtgggaaaacatg 160



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 ttccacagctttcttgaact 41
          ||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51




>41661_vvi-MIR396b:mirbase
          Length = 108

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 13 gccatgctcttccacagctttcttgaact 41
          |||||||| ||||||||||||||||||||
Sbjct: 5  gccatgcttttccacagctttcttgaact 33



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 73  tcaagaaagctgtgggaaaacatgg 97
           ||||||||||||||||||| |||||
Sbjct: 81  tcaagaaagctgtgggaaaccatgg 105




>41212_ccl-MIR396:mirbase
          Length = 277

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 69  gagctcaagaaagctgtgggaaaacatgg 97
           ||||||||||||||||||||| |||||||
Sbjct: 232 gagctcaagaaagctgtgggagaacatgg 260



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 15  catgctcttccacagctttcttgaact 41
           |||||| ||||||||||||||||||||
Sbjct: 136 catgcttttccacagctttcttgaact 162




>41660_vvi-MIR396a:mirbase
          Length = 116

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 15 catgctcttccacagctttcttgaacta 42
          |||||| |||||||||||||||||||||
Sbjct: 7  catgcttttccacagctttcttgaacta 34



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  agctcaagaaagctgtggga 89
           ||||||||||||||||||||
Sbjct: 86  agctcaagaaagctgtggga 105




>41439_ptc-MIR396e:mirbase
          Length = 145

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 70  agctcaagaaagctgtgggaaaacatgg 97
           |||||||||||||||||||| |||||||
Sbjct: 118 agctcaagaaagctgtgggagaacatgg 145



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 15 catgctcttccacagctttcttgaact 41
          |||||| ||||||||||||||||||||
Sbjct: 4  catgcttttccacagctttcttgaact 30




>41438_ptc-MIR396d:mirbase
          Length = 154

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 15 catgctcttccacagctttcttgaact 41
          |||||| ||||||||||||||||||||
Sbjct: 4  catgcttttccacagctttcttgaact 30



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 70  agctcaagaaagctgtgggaaaacatgg 97
           ||||||||||||| |||||| |||||||
Sbjct: 127 agctcaagaaagccgtgggagaacatgg 154




>41141_tcc-MIR396d:mirbase
          Length = 182

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 70  agctcaagaaagctgtgggaaaacatg 96
           ||||||||||||| |||||||||||||
Sbjct: 141 agctcaagaaagccgtgggaaaacatg 167




>40476_gma-MIR396d:mirbase
          Length = 108

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 15 catgctcttccacagctttcttgaact 41
          |||||| ||||||||||||||||||||
Sbjct: 4  catgcttttccacagctttcttgaact 30



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 70 agctcaagaaagctgtggga 89
          ||||||||||||||||||||
Sbjct: 78 agctcaagaaagctgtggga 97




>40474_gma-MIR396b:mirbase
          Length = 126

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 15 catgctcttccacagctttcttgaact 41
          |||||| ||||||||||||||||||||
Sbjct: 14 catgcttttccacagctttcttgaact 40



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  agctcaagaaagctgtggga 89
           ||||||||||||||||||||
Sbjct: 88  agctcaagaaagctgtggga 107




>42814_zma-MIR396h:mirbase
          Length = 124

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tcttccacagctttcttgaact 41
           ||||||||||||||||||||||
Sbjct: 100 tcttccacagctttcttgaact 79




>42813_zma-MIR396g:mirbase
          Length = 114

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 20  tcttccacagctttcttgaact 41
           ||||||||||||||||||||||
Sbjct: 113 tcttccacagctttcttgaact 92




>42808_zma-MIR396b:mirbase
          Length = 136

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40




>42807_zma-MIR396a:mirbase
          Length = 137

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40




>42583_sbi-MIR396b:mirbase
          Length = 128

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40




>42582_sbi-MIR396a:mirbase
          Length = 125

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40




>42461_sof-MIR396:mirbase
          Length = 134

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40




>42027_osa-MIR396b:mirbase
          Length = 116

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 9  tcttccacagctttcttgaact 30




>42026_osa-MIR396a:mirbase
          Length = 154

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 9  tcttccacagctttcttgaact 30




>41794_bdi-MIR396d:mirbase
          Length = 152

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 31 tcttccacagctttcttgaact 52




>41793_bdi-MIR396c:mirbase
          Length = 153

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 31 tcttccacagctttcttgaact 52




>41663_vvi-MIR396d:mirbase
          Length = 120

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 9  tcttccacagctttcttgaact 30




>41662_vvi-MIR396c:mirbase
          Length = 108

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 9  tcttccacagctttcttgaact 30




>41436_ptc-MIR396b:mirbase
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 9  tcttccacagctttcttgaact 30




>41435_ptc-MIR396a:mirbase
          Length = 123

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 9  tcttccacagctttcttgaact 30




>41241_csi-MIR396a:mirbase
          Length = 153

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40




>41139_tcc-MIR396b:mirbase
          Length = 151

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40




>41058_ghr-MIR396b:mirbase
          Length = 135

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 9  tcttccacagctttcttgaact 30




>41057_ghr-MIR396a:mirbase
          Length = 136

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 9  tcttccacagctttcttgaact 30




>40727_mtr-MIR396b:mirbase
          Length = 95

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 4  tcttccacagctttcttgaact 25




>40646_lja-MIR396:mirbase
          Length = 108

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 14 tcttccacagctttcttgaact 35




>40477_gma-MIR396e:mirbase
          Length = 114

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 5  tcttccacagctttcttgaact 26




>40475_gma-MIR396c:mirbase
          Length = 117

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 16 atgctcttccacagctttcttgaact 41
          ||||| ||||||||||||||||||||
Sbjct: 15 atgcttttccacagctttcttgaact 40




>40473_gma-MIR396a:mirbase
          Length = 140

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaact 40




>40085_ath-MIR396a:mirbase
          Length = 151

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 9  tcttccacagctttcttgaact 30




>39877_aly-MIR396a:mirbase
          Length = 172

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 tcttccacagctttcttgaact 41
          ||||||||||||||||||||||
Sbjct: 22 tcttccacagctttcttgaact 43




>42584_sbi-MIR396c:mirbase
          Length = 162

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 13 gccatgctcttccacagctttcttgaact 41
          |||||||  ||||||||||||||||||||
Sbjct: 12 gccatgcctttccacagctttcttgaact 40




>42028_osa-MIR396c:mirbase
          Length = 141

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 13 gccatgctcttccacagctttcttgaact 41
          |||||||  ||||||||||||||||||||
Sbjct: 2  gccatgcctttccacagctttcttgaact 30




>41437_ptc-MIR396c:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 13 gccatgctcttccacagctttcttgaact 41
          |||||| | ||||||||||||||||||||
Sbjct: 2  gccatgtttttccacagctttcttgaact 30



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 73 tcaagaaagctgtgggaaaacatgg 97
          ||||||||||||||| |||||||||
Sbjct: 27 tcaagaaagctgtggaaaaacatgg 3




>41142_tcc-MIR396e:mirbase
          Length = 146

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 13 gccatgctcttccacagctttcttgaact 41
          |||||| | ||||||||||||||||||||
Sbjct: 12 gccatgttattccacagctttcttgaact 40




>40726_mtr-MIR396a:mirbase
          Length = 93

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 17 tgctcttccacagctttcttgaact 41
          |||| ||||||||||||||||||||
Sbjct: 1  tgcttttccacagctttcttgaact 25



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 70 agctcaagaaagctgtggga 89
          ||||||||||||||||||||
Sbjct: 69 agctcaagaaagctgtggga 88




>40379_rco-MIR396:mirbase
          Length = 124

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 17 tgctcttccacagctttcttgaact 41
          |||| ||||||||||||||||||||
Sbjct: 1  tgcttttccacagctttcttgaact 25



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 73  tcaagaaagctgtgggaaaacatg 96
           ||||||||||||||||| ||||||
Sbjct: 101 tcaagaaagctgtgggagaacatg 124




>42812_zma-MIR396f:mirbase
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 ttccacagctttcttgaact 41
          ||||||||||||||||||||
Sbjct: 2  ttccacagctttcttgaact 21




>42811_zma-MIR396e:mirbase
          Length = 166

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 ttccacagctttcttgaact 41
          ||||||||||||||||||||
Sbjct: 2  ttccacagctttcttgaact 21




>42472_ssp-MIR396:mirbase
          Length = 95

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 ttccacagctttcttgaact 41
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>41795_bdi-MIR396e:mirbase
          Length = 201

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 ttccacagctttcttgaact 41
          ||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51




>41243_csi-MIR396c:mirbase
          Length = 178

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 73 tcaagaaagctgtgggaaaacatg 96
          ||||||||||||||| ||||||||
Sbjct: 29 tcaagaaagctgtggaaaaacatg 6



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 ttccacagctttcttgaact 41
          ||||||||||||||||||||
Sbjct: 13 ttccacagctttcttgaact 32




>41242_csi-MIR396b:mirbase
          Length = 134

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 ttccacagctttcttgaact 41
          ||||||||||||||||||||
Sbjct: 20 ttccacagctttcttgaact 39




>41189_aqc-MIR396b:mirbase
          Length = 89

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 ttccacagctttcttgaact 41
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>41188_aqc-MIR396a:mirbase
          Length = 122

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 ttccacagctttcttgaact 41
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>41138_tcc-MIR396a:mirbase
          Length = 146

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 ttccacagctttcttgaact 41
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>40296_bna-MIR396a:mirbase
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 ttccacagctttcttgaact 41
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>39426_pta-MIR396:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 ttccacagctttcttgaact 41
          ||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36