miRNEST 2.0, an integrative microRNA resource :: BLAST
>39380_pab-MIR396b:mirbase
Length = 116
Score = 228 bits (115), Expect = 7e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 4 tcatagttttccacggctttcttgaacttacttcacgatcaggtctgttggcggccgatc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcatagttttccacggctttcttgaacttacttcacgatcaggtctgttggcggccgatc 60
Query: 64 gcatcgataacagatccgggtgacaagatcaagaaagccgtgggaaattatagag 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcatcgataacagatccgggtgacaagatcaagaaagccgtgggaaattatagag 115
>39381_pab-MIR396c:mirbase
Length = 143
Score = 58.0 bits (29), Expect = 2e-09
Identities = 87/106 (82%), Gaps = 4/106 (3%)
Strand = Plus / Plus
Query: 4 tcatagttttccacggctttcttgaacttacttcacgatcaggtctgttggcggccgatc 63
||||| ||||||||||||||||||||||| | ||||| || |||||||| | ||||
Sbjct: 17 tcatatttttccacggctttcttgaacttcc----cgatcgggagtgttggcgacagatc 72
Query: 64 gcatcgataacagatccgggtgacaagatcaagaaagccgtgggaa 109
||| || ||||||||||| | ||| ||||||||||||||||||
Sbjct: 73 gcaccgctaacagatccgcatacgaagctcaagaaagccgtgggaa 118
>41441_ptc-MIR396g:mirbase
Length = 168
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 ttttccacggctttcttgaactt 32
|||||||||||||||||||||||
Sbjct: 9 ttttccacggctttcttgaactt 31
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 ttttccacggctttcttgaactt 32
|||||||||||||||||||||||
Sbjct: 126 ttttccacggctttcttgaactt 104
>41141_tcc-MIR396d:mirbase
Length = 182
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 ttttccacggctttcttgaactt 32
|||||||||||||||||||||||
Sbjct: 19 ttttccacggctttcttgaactt 41
>41440_ptc-MIR396f:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 ttttccacggctttcttgaact 31
||||||||||||||||||||||
Sbjct: 9 ttttccacggctttcttgaact 30
>40086_ath-MIR396b:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 3 gtcatagttttccacggctttcttgaactt 32
|||||| |||||||| ||||||||||||||
Sbjct: 2 gtcatacttttccacagctttcttgaactt 31
>39878_aly-MIR396b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 3 gtcatagttttccacggctttcttgaactt 32
|||||| |||||||| ||||||||||||||
Sbjct: 23 gtcatatttttccacagctttcttgaactt 52
>39426_pta-MIR396:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 3 gtcatagttttccacggctttcttgaactt 32
|||||| |||||||| ||||||||||||||
Sbjct: 8 gtcatacttttccacagctttcttgaactt 37
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 12 ttccacggctttcttgaactt 32
|||||||||||||||||||||
Sbjct: 94 ttccacggctttcttgaactt 74
>39741_smo-MIR396:mirbase
Length = 168
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 ttttccacggctttcttgaac 30
|||||||||||||||||||||
Sbjct: 9 ttttccacggctttcttgaac 29
