miRNEST 2.0, an integrative microRNA resource :: BLAST
>39381_pab-MIR396c:mirbase
Length = 143
Score = 101 bits (51), Expect = 1e-22
Identities = 92/103 (89%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 12 ttcccacggctttcttgagcttgttatccggatctgttatcgatgcga-ctgaccgccaa 70
|||||||||||||||||||||| ||| ||||||||||| || ||||| ||| | |||||
Sbjct: 118 ttcccacggctttcttgagcttcgtatgcggatctgttagcggtgcgatctgtc-gccaa 60
Query: 71 catttccgatcgagaagttcaagaaagccgtggaaaaatatga 113
|| | ||||||| ||||||||||||||||||||||||||||||
Sbjct: 59 cactcccgatcgggaagttcaagaaagccgtggaaaaatatga 17
>39380_pab-MIR396b:mirbase
Length = 116
Score = 93.7 bits (47), Expect = 3e-20
Identities = 96/112 (85%), Gaps = 4/112 (3%)
Strand = Plus / Minus
Query: 6 tataatttcccacggctttcttgagcttgttatccggatctgttatcgatgcgactgacc 65
|||||||||||||||||||||||| ||||| | ||||||||||||||||||||| | ||
Sbjct: 112 tataatttcccacggctttcttgatcttgtcacccggatctgttatcgatgcgatcggcc 53
Query: 66 gccaacatttccgatcgag----aagttcaagaaagccgtggaaaaatatga 113
||||||| | ||||| | ||||||||||||||||||||||| |||||
Sbjct: 52 gccaacagacctgatcgtgaagtaagttcaagaaagccgtggaaaactatga 1
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 82 gagaagttcaagaaagccgtggaaaaatatgacag 116
|||||||||||||||||||||||||| |||||||
Sbjct: 101 gagaagttcaagaaagccgtggaaaagcatgacag 135
>41243_csi-MIR396c:mirbase
Length = 178
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 83 agaagttcaagaaagccgtggaaaaatatgacag 116
|||||||||||||||| ||||||||| |||||||
Sbjct: 35 agaagttcaagaaagctgtggaaaaacatgacag 2
>39878_aly-MIR396b:mirbase
Length = 188
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 85 aagttcaagaaagccgtggaaaaatatgac 114
|||||||||||||| |||||||||||||||
Sbjct: 52 aagttcaagaaagctgtggaaaaatatgac 23
>41441_ptc-MIR396g:mirbase
Length = 168
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 85 aagttcaagaaagccgtggaaaa 107
|||||||||||||||||||||||
Sbjct: 31 aagttcaagaaagccgtggaaaa 9
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 tttcccacggctttcttgagctt 33
|||||||||||||||||||||||
Sbjct: 162 tttcccacggctttcttgagctt 140
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 89 tcaagaaagccgtggaaaaatatga 113
||||||||||||||| |||||||||
Sbjct: 144 tcaagaaagccgtgggaaaatatga 168
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 83 agaagttcaagaaagccgtggaa 105
|||||||||||||||||||||||
Sbjct: 72 agaagttcaagaaagccgtggaa 94
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 84 gaagttcaagaaagccgtggaaaaa 108
||||||||||||||| |||||||||
Sbjct: 32 gaagttcaagaaagctgtggaaaaa 8
>41141_tcc-MIR396d:mirbase
Length = 182
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 85 aagttcaagaaagccgtggaaaa 107
|||||||||||||||||||||||
Sbjct: 41 aagttcaagaaagccgtggaaaa 19
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 tttcccacggctttcttgagctt 33
|||||||||||||||||||||||
Sbjct: 162 tttcccacggctttcttgagctt 140
>39426_pta-MIR396:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 85 aagttcaagaaagccgtggaaaaatatgaca 115
|||||||||||||| |||||||| |||||||
Sbjct: 37 aagttcaagaaagctgtggaaaagtatgaca 7
>41440_ptc-MIR396f:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 agttcaagaaagccgtggaaaa 107
||||||||||||||||||||||
Sbjct: 30 agttcaagaaagccgtggaaaa 9
>40086_ath-MIR396b:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 85 aagttcaagaaagccgtggaaaaatatgac 114
|||||||||||||| |||||||| ||||||
Sbjct: 31 aagttcaagaaagctgtggaaaagtatgac 2
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 82 gagaagttcaagaaagccgtggaaa 106
||||||||||||||||| |||||||
Sbjct: 44 gagaagttcaagaaagctgtggaaa 20
>42028_osa-MIR396c:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 82 gagaagttcaagaaagccgtggaaa 106
||||||||||||||||| |||||||
Sbjct: 34 gagaagttcaagaaagctgtggaaa 10
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 83 agaagttcaagaaagccgtggaaaa 107
|||||||||||||||| ||||||||
Sbjct: 36 agaagttcaagaaagctgtggaaaa 12
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 83 agaagttcaagaaagccgtggaaaa 107
|||||||||||||||| ||||||||
Sbjct: 33 agaagttcaagaaagctgtggaaaa 9
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 13 tcccacggctttcttgagctt 33
|||||||||||||||||||||
Sbjct: 146 tcccacggctttcttgagctt 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 84 gaagttcaagaaagccgtggaaaa 107
||||||||||||||| ||||||||
Sbjct: 32 gaagttcaagaaagctgtggaaaa 9
>41242_csi-MIR396b:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 86 agttcaagaaagccgtggaaaaata 110
||||||||||||| |||||||||||
Sbjct: 39 agttcaagaaagctgtggaaaaata 15
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 83 agaagttcaagaaagccgtggaaaa 107
|||||||||||||||| ||||||||
Sbjct: 28 agaagttcaagaaagctgtggaaaa 4
>40476_gma-MIR396d:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 83 agaagttcaagaaagccgtggaaaa 107
|||||||||||||||| ||||||||
Sbjct: 33 agaagttcaagaaagctgtggaaaa 9
>40475_gma-MIR396c:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 83 agaagttcaagaaagccgtggaaaa 107
|||||||||||||||| ||||||||
Sbjct: 43 agaagttcaagaaagctgtggaaaa 19
>40474_gma-MIR396b:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 83 agaagttcaagaaagccgtggaaaa 107
|||||||||||||||| ||||||||
Sbjct: 43 agaagttcaagaaagctgtggaaaa 19
>40379_rco-MIR396:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 83 agaagttcaagaaagccgtggaaaa 107
|||||||||||||||| ||||||||
Sbjct: 28 agaagttcaagaaagctgtggaaaa 4
>39741_smo-MIR396:mirbase
Length = 168
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 87 gttcaagaaagccgtggaaaa 107
|||||||||||||||||||||
Sbjct: 29 gttcaagaaagccgtggaaaa 9
>42812_zma-MIR396f:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 83 agaagttcaagaaagccgtggaaa 106
|||||||||||||||| |||||||
Sbjct: 24 agaagttcaagaaagctgtggaaa 1
>42811_zma-MIR396e:mirbase
Length = 166
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 83 agaagttcaagaaagccgtggaaa 106
|||||||||||||||| |||||||
Sbjct: 24 agaagttcaagaaagctgtggaaa 1
>41212_ccl-MIR396:mirbase
Length = 277
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 84 gaagttcaagaaagccgtggaaaa 107
||||||||||||||| ||||||||
Sbjct: 164 gaagttcaagaaagctgtggaaaa 141
