miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39374_pab-MIR160a:mirbase
          Length = 106

 Score =  210 bits (106), Expect = 2e-55
 Identities = 106/106 (100%)
 Strand = Plus / Plus

                                                                       
Query: 8   aaaggttgatgtgtgcctggctccctgtatgccacatacaaggcccagtcatatgttgat 67
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaaggttgatgtgtgcctggctccctgtatgccacatacaaggcccagtcatatgttgat 60

                                                         
Query: 68  tggcttcataggtggcttacaaggagccaagcatacgttttcttac 113
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tggcttcataggtggcttacaaggagccaagcatacgttttcttac 106




>42702_zma-MIR160b:mirbase
          Length = 121

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 17 tgtgtgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||||||
Sbjct: 17 tgtgtgcctggctccctgtatgccaca 43




>41923_osa-MIR160a:mirbase
          Length = 88

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 18 gtgtgcctggctccctgtatgccaca 43
          ||||||||||||||||||||||||||
Sbjct: 1  gtgtgcctggctccctgtatgccaca 26




>41733_bdi-MIR160c:mirbase
          Length = 148

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 19 tgtgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccaca 53




>41575_vvi-MIR160c:mirbase
          Length = 106

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 19 tgtgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||||
Sbjct: 9  tgtgcctggctccctgtatgccaca 33




>40339_rco-MIR160a:mirbase
          Length = 92

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 17 tgtgtgcctggctccctgtatgcca 41
          |||||||||||||||||||||||||
Sbjct: 2  tgtgtgcctggctccctgtatgcca 26




>42703_zma-MIR160c:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 19 tgtgcctggctccctgtatgccac 42
          ||||||||||||||||||||||||
Sbjct: 5  tgtgcctggctccctgtatgccac 28




>42701_zma-MIR160a:mirbase
          Length = 104

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 20 gtgcctggctccctgtatgccaca 43
          ||||||||||||||||||||||||
Sbjct: 9  gtgcctggctccctgtatgccaca 32




>42677_ttu-MIR160:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 19 tgtgcctggctccctgtatgccac 42
          ||||||||||||||||||||||||
Sbjct: 7  tgtgcctggctccctgtatgccac 30




>41925_osa-MIR160c:mirbase
          Length = 99

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 19 tgtgcctggctccctgtatgccac 42
          ||||||||||||||||||||||||
Sbjct: 5  tgtgcctggctccctgtatgccac 28




>41734_bdi-MIR160d:mirbase
          Length = 150

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 19 tgtgcctggctccctgtatgccac 42
          ||||||||||||||||||||||||
Sbjct: 29 tgtgcctggctccctgtatgccac 52




>41732_bdi-MIR160b:mirbase
          Length = 146

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 20 gtgcctggctccctgtatgccaca 43
          ||||||||||||||||||||||||
Sbjct: 30 gtgcctggctccctgtatgccaca 53




>40661_mtr-MIR160d:mirbase
          Length = 91

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 18 gtgtgcctggctccctgtatgcca 41
          ||||||||||||||||||||||||
Sbjct: 3  gtgtgcctggctccctgtatgcca 26




>40020_ath-MIR160b:mirbase
          Length = 89

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 20 gtgcctggctccctgtatgccaca 43
          ||||||||||||||||||||||||
Sbjct: 4  gtgcctggctccctgtatgccaca 27




>39808_aly-MIR160b:mirbase
          Length = 125

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 20 gtgcctggctccctgtatgccaca 43
          ||||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgccaca 43




>42707_zma-MIR160g:mirbase
          Length = 86

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 2  tgcctggctccctgtatgccaca 24




>42497_sbi-MIR160b:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccaca 23




>42496_sbi-MIR160a:mirbase
          Length = 84

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccaca 23




>41924_osa-MIR160b:mirbase
          Length = 139

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 gtgcctggctccctgtatgccac 42
          |||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgccac 51




>41869_far-MIR160:mirbase
          Length = 148

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 53 tgcctggctccctgtatgccaca 75




>41308_ptc-MIR160d:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33




>41307_ptc-MIR160c:mirbase
          Length = 98

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 19 tgtgcctggctccctgtatgcca 41
          |||||||||||||||||||||||
Sbjct: 9  tgtgcctggctccctgtatgcca 31




>41306_ptc-MIR160b:mirbase
          Length = 98

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 19 tgtgcctggctccctgtatgcca 41
          |||||||||||||||||||||||
Sbjct: 9  tgtgcctggctccctgtatgcca 31




>41305_ptc-MIR160a:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33




>41219_csi-MIR160:mirbase
          Length = 143

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 19 tgtgcctggctccctgtatgcca 41
          |||||||||||||||||||||||
Sbjct: 31 tgtgcctggctccctgtatgcca 53




>40662_mtr-MIR160e:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 19 tgtgcctggctccctgtatgcca 41
          |||||||||||||||||||||||
Sbjct: 4  tgtgcctggctccctgtatgcca 26




>40659_mtr-MIR160b:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 19 tgtgcctggctccctgtatgcca 41
          |||||||||||||||||||||||
Sbjct: 4  tgtgcctggctccctgtatgcca 26




>40436_gma-MIR160:mirbase
          Length = 119

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 19 tgtgcctggctccctgtatgcca 41
          |||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41




>40340_rco-MIR160b:mirbase
          Length = 96

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 21 tgcctggctccctgtatgccaca 43
          |||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccaca 28




>42705_zma-MIR160e:mirbase
          Length = 94

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 9  tgcctggctccctgtatgccac 30




>42704_zma-MIR160d:mirbase
          Length = 142

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42




>42636_tae-MIR160:mirbase
          Length = 148

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgccac 43




>42500_sbi-MIR160e:mirbase
          Length = 95

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>42499_sbi-MIR160d:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>42498_sbi-MIR160c:mirbase
          Length = 83

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22




>41926_osa-MIR160d:mirbase
          Length = 142

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 8  tgcctggctccctgtatgccac 29




>41731_bdi-MIR160a:mirbase
          Length = 175

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 32 tgcctggctccctgtatgccac 53




>40658_mtr-MIR160:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 20 gtgcctggctccctgtatgcca 41
          ||||||||||||||||||||||
Sbjct: 20 gtgcctggctccctgtatgcca 41




>40021_ath-MIR160c:mirbase
          Length = 89

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgccac 26




>39809_aly-MIR160c:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 24 tgcctggctccctgtatgccac 45



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 78  ggtggcttacaaggagccaagcat 101
           |||||| |||||||||||||||||
Sbjct: 81  ggtggcgtacaaggagccaagcat 104




>39807_aly-MIR160a:mirbase
          Length = 158

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 16 atgtgtgcctggctccctgtatgcca 41
          |||| |||||||||||||||||||||
Sbjct: 37 atgtatgcctggctccctgtatgcca 62




>39732_smo-MIR160b:mirbase
          Length = 108

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34




>39460_ppt-MIR160f:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51




>39459_ppt-MIR160e:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51




>39455_ppt-MIR160a:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tgcctggctccctgtatgccac 42
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32




>41577_vvi-MIR160e:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>41576_vvi-MIR160d:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>41529_sly-MIR160a:mirbase
          Length = 129

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40




>41312_ptc-MIR160h:mirbase
          Length = 98

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 17 tgtgtgcctggctccctgtatgcca 41
          |||||||||||||||||| ||||||
Sbjct: 7  tgtgtgcctggctccctgcatgcca 31




>41166_aqc-MIR160b:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>41088_tcc-MIR160b:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>40312_bra-MIR160a:mirbase
          Length = 127

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46




>40019_ath-MIR160a:mirbase
          Length = 85

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgcca 24




>39731_smo-MIR160a:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>39463_ppt-MIR160i:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 gcctggctccctgtatgccac 42
          |||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51




>39375_pab-MIR160b:mirbase
          Length = 116

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 tgcctggctccctgtatgcca 41
          |||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40