miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39419_pta-MIR159c:mirbase
          Length = 85

 Score =  168 bits (85), Expect = 4e-43
 Identities = 85/85 (100%)
 Strand = Plus / Plus

                                                                      
Query: 6  gatgtgtgaatgatgcgggagctgattttgtccaggaaatgtcttttccttggattgaag 65
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gatgtgtgaatgatgcgggagctgattttgtccaggaaatgtcttttccttggattgaag 60

                                   
Query: 66 ggagctcccttatgtagcatacatt 90
          |||||||||||||||||||||||||
Sbjct: 61 ggagctcccttatgtagcatacatt 85




>39730_smo-MIR159:mirbase
          Length = 279

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 53  ccttggattgaagggagctccctt 76
           ||||||||||||||||||||||||
Sbjct: 248 ccttggattgaagggagctccctt 271




>42693_zma-MIR159d:mirbase
          Length = 217

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  cttggattgaagggagctcc 73
           ||||||||||||||||||||
Sbjct: 178 cttggattgaagggagctcc 197




>42692_zma-MIR159c:mirbase
          Length = 217

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  cttggattgaagggagctcc 73
           ||||||||||||||||||||
Sbjct: 178 cttggattgaagggagctcc 197




>42495_sbi-MIR159b:mirbase
          Length = 253

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  cttggattgaagggagctcc 73
           ||||||||||||||||||||
Sbjct: 214 cttggattgaagggagctcc 233




>42454_sof-MIR159c:mirbase
          Length = 238

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  cttggattgaagggagctcc 73
           ||||||||||||||||||||
Sbjct: 199 cttggattgaagggagctcc 218




>41638_vvi-MIR319f:mirbase
          Length = 193

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 7   atgtgtgaatgatgcgggag 26
           ||||||||||||||||||||
Sbjct: 114 atgtgtgaatgatgcgggag 133




>41406_ptc-MIR319c:mirbase
          Length = 196

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 7   atgtgtgaatgatgcgggag 26
           ||||||||||||||||||||
Sbjct: 120 atgtgtgaatgatgcgggag 139




>41302_ptc-MIR159d:mirbase
          Length = 194

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  cttggattgaagggagctcc 73
           ||||||||||||||||||||
Sbjct: 165 cttggattgaagggagctcc 184




>40369_rco-MIR319c:mirbase
          Length = 188

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 7   atgtgtgaatgatgcgggag 26
           ||||||||||||||||||||
Sbjct: 115 atgtgtgaatgatgcgggag 134




>39740_smo-MIR319:mirbase
          Length = 215

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 53  ccttggattgaagggagctccctt 76
           ||||||| ||||||||||||||||
Sbjct: 184 ccttggactgaagggagctccctt 207




>39424_pta-MIR319:mirbase
          Length = 206

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 54 cttggattgaagggagctcc 73
          ||||||||||||||||||||
Sbjct: 27 cttggattgaagggagctcc 8




>39417_pta-MIR159a:mirbase
          Length = 210

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  cttggattgaagggagctcc 73
           ||||||||||||||||||||
Sbjct: 184 cttggattgaagggagctcc 203