miRNEST 2.0, an integrative microRNA resource :: BLAST
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 204 bits (103), Expect = 1e-53
Identities = 106/107 (99%)
Strand = Plus / Plus
Query: 22 gctggagtgttccaaagggatcgcattgatctaatgactctcgatgtctaaatcatatta 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctggagtgttccaaagggatcgcattgatctaatgactctcgatgtctaaatcatatta 60
Query: 82 atgtttagtcttttcgttggatcatgcgatcccttaggaattttcca 128
||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtttagttttttcgttggatcatgcgatcccttaggaattttcca 107
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 153 bits (77), Expect = 4e-38
Identities = 98/105 (93%)
Strand = Plus / Plus
Query: 24 tggagtgttccaaagggatcgcattgatctaatgactctcgatgtctaaatcatattaat 83
||||||||||||||||||||||||||||||||||||| | |||||||| || || |||||
Sbjct: 3 tggagtgttccaaagggatcgcattgatctaatgacttttgatgtctatatgatgttaat 62
Query: 84 gtttagtcttttcgttggatcatgcgatcccttaggaattttcca 128
|||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 63 gtttagtcatttcattggatcatgcgatcccttaggaattttcca 107
>40373_rco-MIR393:mirbase
Length = 108
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 30 gttccaaagggatcgcattgatctaatg 57
||||||||||||||||||||||||||||
Sbjct: 4 gttccaaagggatcgcattgatctaatg 31
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 ttggatcatgcgatcccttaggaa 121
||||||||||||||||||||||||
Sbjct: 79 ttggatcatgcgatcccttaggaa 102
>41054_ghr-MIR393:mirbase
Length = 139
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 98 ttggatcatgcgatcccttaggaattttcca 128
||||||||||||||||||| |||||||||||
Sbjct: 107 ttggatcatgcgatcccttcggaattttcca 137
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatctaatg 57
||||||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatctaatg 36
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 19 gcagctggagtgttccaaagggatcgcattgatctaat 56
|||| ||||| | |||||||||||||||||||||||||
Sbjct: 8 gcaggtggagagctccaaagggatcgcattgatctaat 45
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 98 ttggatcatgcgatcccttaggaattttcca 128
||||||||||| ||||||| |||||||||||
Sbjct: 116 ttggatcatgcaatcccttcggaattttcca 146
>42788_zma-MIR393c:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatctaa 55
||||||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatctaa 25
>42786_zma-MIR393a:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatcta 54
|||||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatcta 43
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 gttccaaagggatcgcattgatc 52
|||||||||||||||||||||||
Sbjct: 9 gttccaaagggatcgcattgatc 31
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 98 ttggatcatgcgatcccttaggaa 121
||||||||||| ||||||||||||
Sbjct: 92 ttggatcatgctatcccttaggaa 115
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatct 53
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatct 22
>41999_osa-MIR393b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatct 53
||||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatct 48
>41998_osa-MIR393b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatct 53
||||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatct 48
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatct 53
||||||||||||||||||||||
Sbjct: 42 tccaaagggatcgcattgatct 63
>42787_zma-MIR393b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatc 22
>42566_sbi-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 20 tccaaagggatcgcattgatc 40
>41997_osa-MIR393:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 36 tccaaagggatcgcattgatc 56
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41238_csi-MIR393:mirbase
Length = 145
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
>40706_mtr-MIR393:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>40470_gma-MIR393:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40295_bna-MIR393:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>40076_ath-MIR393b:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40075_ath-MIR393a:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>39866_aly-MIR393b:mirbase
Length = 169
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 18 tccaaagggatcgcattgatc 38
>39865_aly-MIR393a:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 tccaaagggatcgcattgatc 52
|||||||||||||||||||||
Sbjct: 18 tccaaagggatcgcattgatc 38
