miRNEST 2.0, an integrative microRNA resource :: BLAST
>41442_ptc-MIR397a:mirbase
Length = 120
Score = 186 bits (94), Expect = 3e-48
Identities = 114/120 (95%), Gaps = 3/120 (2%)
Strand = Plus / Plus
Query: 12 tggagaaccatcattgagtgcagcgttgatgaaatcctacattttgtgctcttaaactgt 71
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 1 tggagaaccatcattgagtgcagcgttgatgaaatcctccattttgtgctattaaactgt 60
Query: 72 taccaaccctttat---ccatggcatcatttcaccagcgctgcattcaatcatgtttttc 128
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taccaaccctttatggggcatggcatcatttcaccagcgctgcattcaatcatgtttttc 120
>41443_ptc-MIR397b:mirbase
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 93 atcatttcaccagcgctgcattcaatcatgtttttc 128
||||||||||||||||||||||||| ||||||||||
Sbjct: 79 atcatttcaccagcgctgcattcaaccatgtttttc 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 cattgagtgcagcgttgatgaaat 46
||||||||||||||||||||||||
Sbjct: 12 cattgagtgcagcgttgatgaaat 35
>40380_rco-MIR397:mirbase
Length = 157
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 96 atttcaccagcgctgcattcaatcatgttttt 127
||||||||||||||||||||||||||||||||
Sbjct: 126 atttcaccagcgctgcattcaatcatgttttt 157
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaa 44
|||||||||||||||||||||||||
Sbjct: 4 catcattgagtgcagcgttgatgaa 28
>41664_vvi-MIR397a:mirbase
Length = 118
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaaa 45
||||||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatgaaa 34
>42037_osa-MIR397a:mirbase
Length = 114
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaa 44
|||||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatgaa 33
>41798_bdi-MIR397b:mirbase
Length = 292
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaa 44
|||||||||||||||||||||||||
Sbjct: 30 catcattgagtgcagcgttgatgaa 54
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaa 44
|||||||||||||||||||||||||
Sbjct: 176 catcattgagtgcagcgttgatgaa 200
>41797_bdi-MIR397a:mirbase
Length = 124
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaa 44
|||||||||||||||||||||||||
Sbjct: 16 catcattgagtgcagcgttgatgaa 40
>41244_csi-MIR397:mirbase
Length = 156
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaa 44
|||||||||||||||||||||||||
Sbjct: 16 catcattgagtgcagcgttgatgaa 40
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 97 tttcaccagcgctgcattcaatcatgttttt 127
|||||||||||||||| || |||||||||||
Sbjct: 87 tttcaccagcgctgcactcgatcatgttttt 117
>41143_tcc-MIR397:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatgaa 44
|||||||||||||||||||||||||
Sbjct: 19 catcattgagtgcagcgttgatgaa 43
>40298_bna-MIR397b:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatg 42
|||||||||||||||||||||||
Sbjct: 4 catcattgagtgcagcgttgatg 26
>40297_bna-MIR397a:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatg 42
|||||||||||||||||||||||
Sbjct: 4 catcattgagtgcagcgttgatg 26
>40087_ath-MIR397a:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatg 42
|||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatg 31
>39880_aly-MIR397b:mirbase
Length = 131
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatg 42
|||||||||||||||||||||||
Sbjct: 17 catcattgagtgcagcgttgatg 39
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 103 cagcgctgcattcaatcatgtttttctaa 131
||||| |||||||||| ||||||||||||
Sbjct: 95 cagcgttgcattcaattatgtttttctaa 123
>39879_aly-MIR397a:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttgatg 42
|||||||||||||||||||||||
Sbjct: 18 catcattgagtgcagcgttgatg 40
>42587_sbi-MIR397:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tcattgagtgcagcgttgatga 43
||||||||||||||||||||||
Sbjct: 1 tcattgagtgcagcgttgatga 22
>42038_osa-MIR397b:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 24 attgagtgcagcgttgatgaa 44
|||||||||||||||||||||
Sbjct: 13 attgagtgcagcgttgatgaa 33
>41547_sly-MIR397:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 agaaccatcattgagtgcagcgttgatga 43
|||| ||| ||||||||||||||||||||
Sbjct: 11 agaaacatgattgagtgcagcgttgatga 39
>39382_pab-MIR397:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 catcattgagtgcagcgttga 40
|||||||||||||||||||||
Sbjct: 15 catcattgagtgcagcgttga 35
>41891_hvu-MIR397:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 25 ttgagtgcagcgttgatgaa 44
||||||||||||||||||||
Sbjct: 14 ttgagtgcagcgttgatgaa 33
>40088_ath-MIR397b:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 103 cagcgctgcattcaatcatgtttttcta 130
||||| |||||||||| |||||||||||
Sbjct: 82 cagcgttgcattcaattatgtttttcta 109
