miRNEST 2.0, an integrative microRNA resource :: BLAST
>41510_ptc-MIR530b:mirbase
Length = 172
Score = 280 bits (141), Expect = 4e-76
Identities = 166/173 (95%), Gaps = 1/173 (0%)
Strand = Plus / Plus
Query: 11 gccaatatgttgcctttatctgcatttgcacctgcatcttattgcttttgttttgttctt 70
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||
Sbjct: 1 gccaatatgttgcctttatctgcatttgcacctgcatctt-ttgcgtttgttttgttttt 59
Query: 71 gactccacaaacaaaatcaacttctgtcgatacagtatgtggtacaattagctatggaaa 130
|||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||
Sbjct: 60 gactccacaaacaaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaa 119
Query: 131 ctcataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 183
|| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 172
>41509_ptc-MIR530a:mirbase
Length = 144
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 11 gccaatatgttgcctttatctgcatttgcacctgcatctta 51
||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 1 gccaacatgttgcctttatctgcatttgcacctgcacctta 41
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 144 ttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 183
|||||||||||||||| ||||||||||||||||| |||||
Sbjct: 105 ttgaggtgcaggtgcaggtgcaggtgaatgccatgttggt 144
>41263_csi-MIR530b:mirbase
Length = 154
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 23 cctttatctgcatttgcacctgcatcttattgc 55
|||||||||||||||||||||||||||| ||||
Sbjct: 3 cctttatctgcatttgcacctgcatcttgttgc 35
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 147 aggtgcaggtgcaagtgcaggtgaatgcc 175
|||||||| ||||||||||| ||||||||
Sbjct: 126 aggtgcagttgcaagtgcagatgaatgcc 154
>41158_tcc-MIR530b:mirbase
Length = 178
Score = 56.0 bits (28), Expect = 1e-08
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 17 atgttgcctttatctgcatttgcacctgcatcttattgcttttgttttgttc 68
|||| ||||||||||||||||||||||||| ||| ||| |||| ||| ||||
Sbjct: 7 atgtagcctttatctgcatttgcacctgcaccttcttgtttttatttggttc 58
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 146 gaggtgcaggtgcaagtgcaggtgaatgccattttgg 182
|||||||||| ||| |||||||||||||||||||||
Sbjct: 137 gaggtgcaggggcagctgcaggtgaatgccattttgg 173
>41157_tcc-MIR530a:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 25 tttatctgcatttgcacctgca 46
||||||||||||||||||||||
Sbjct: 15 tttatctgcatttgcacctgca 36
>41205_aqc-MIR530:mirbase
Length = 142
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tctgcatttgcacctgcatct 49
|||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30
