miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41348_ptc-MIR168b:mirbase
          Length = 136

 Score =  262 bits (132), Expect = 7e-71
 Identities = 135/136 (99%)
 Strand = Plus / Plus

                                                                       
Query: 15  ggtctctaattcgcttggtgcaggtcgggaactgattcagcgatttgattgccagatggc 74
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1   ggtctctaattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60

                                                                       
Query: 75  taaacacgattggctgtgaggcaaattataaaaagaaagagaattggatcccgccttgca 134
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  taaacacgattggctgtgaggcaaattataaaaagaaagagaattggatcccgccttgca 120

                           
Query: 135 tcaactgaatcggaga 150
           ||||||||||||||||
Sbjct: 121 tcaactgaatcggaga 136




>41347_ptc-MIR168a:mirbase
          Length = 160

 Score =  105 bits (53), Expect = 1e-23
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                      
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactgattcagcgatttgattgccagatggc 74
          ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1  ggtctctgattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60

           
Query: 75 t 75
          |
Sbjct: 61 t 61



 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 115 gaattggatcccgccttgcatcaactgaatcggag 149
           |||||||||||||||||||||||||||||||||||
Sbjct: 125 gaattggatcccgccttgcatcaactgaatcggag 159




>41215_crt-MIR168:mirbase
          Length = 201

 Score = 93.7 bits (47), Expect = 4e-20
 Identities = 47/47 (100%)
 Strand = Plus / Plus

                                                         
Query: 5  agttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
          |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  agttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 47



 Score = 81.8 bits (41), Expect = 1e-16
 Identities = 44/45 (97%)
 Strand = Plus / Plus

                                                        
Query: 115 gaattggatcccgccttgcatcaactgaatcggagaccgcggtga 159
           ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 134 gaattggatcccgccttgcatcaactgaatcggagaccgaggtga 178




>41101_tcc-MIR168:mirbase
          Length = 167

 Score = 93.7 bits (47), Expect = 4e-20
 Identities = 47/47 (100%)
 Strand = Plus / Plus

                                                         
Query: 5  agttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
          |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  agttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 47



 Score = 89.7 bits (45), Expect = 6e-19
 Identities = 45/45 (100%)
 Strand = Plus / Plus

                                                        
Query: 115 gaattggatcccgccttgcatcaactgaatcggagaccgcggtga 159
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gaattggatcccgccttgcatcaactgaatcggagaccgcggtga 162




>41210_ccl-MIR168:mirbase
          Length = 176

 Score = 91.7 bits (46), Expect = 2e-19
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                        
Query: 6  gttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
          ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 46



 Score = 79.8 bits (40), Expect = 6e-16
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                       
Query: 115 gaattggatcccgccttgcatcaactgaatcggagaccgcggtg 158
           ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 133 gaattggatcccgccttgcatcaactgaatcggagaccgaggtg 176




>40448_gma-MIR168:mirbase
          Length = 125

 Score = 83.8 bits (42), Expect = 4e-17
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                         
Query: 115 gaattggatcccgccttgcatcaactgaatcggagaccgcggtgaa 160
           ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 79  gaattggatcccgccttgcatcaactgaatcggaggccgcggtgaa 124



 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 13 gcggtctctaattcgcttggtgcaggtcgggaac 46
          ||||||||||||||||||||||||||||||||||
Sbjct: 7  gcggtctctaattcgcttggtgcaggtcgggaac 40




>39833_aly-MIR168b:mirbase
          Length = 176

 Score = 77.8 bits (39), Expect = 2e-15
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                         
Query: 5  agttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
          ||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 23 agttaccggcggtctcggattcgcttggtgcaggtcgggaactgatt 69



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 121 gatcccgccttgcatcaactgaatcggagaccgcggtgaa 160
           ||||||| |||| |||||||||||||||| ||| ||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggagtccgaggtgaa 149




>40044_ath-MIR168b:mirbase
          Length = 124

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                       
Query: 7  ttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
          ||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 1  ttaccggcggtctcggattcgcttggtgcaggtcgggaactgatt 45



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 123 tcccgccttgcatcaactgaatcggagaccgcggtga 159
           ||||| |||| |||||||||||||||| ||| |||||
Sbjct: 88  tcccgtcttgtatcaactgaatcggagtccgaggtga 124




>40355_rco-MIR168:mirbase
          Length = 131

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 109 gaaagagaattggatcccgccttgcatcaactgaatcg 146
           ||||| ||||||||||||||||||||||||||||||||
Sbjct: 91  gaaagtgaattggatcccgccttgcatcaactgaatcg 128



 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 20 ctaattcgcttggtgcaggtcgggaactgatt 51
          ||||||||||||||||||||||||||||||||
Sbjct: 1  ctaattcgcttggtgcaggtcgggaactgatt 32




>41596_vvi-MIR168:mirbase
          Length = 132

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 15 ggtctctaattcgcttggtgcaggtcgggaac 46
          ||||||||||||||||||||||||||||||||
Sbjct: 1  ggtctctaattcgcttggtgcaggtcgggaac 32



 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 121 gatcccgccttgcatcaactgaatcggagac 151
           |||||||||||||||||||||||||||||||
Sbjct: 99  gatcccgccttgcatcaactgaatcggagac 129




>40043_ath-MIR168a:mirbase
          Length = 138

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 117 attggatcccgccttgcatcaactgaatcgga 148
           ||||||||||||||||||||||||||||||||
Sbjct: 96  attggatcccgccttgcatcaactgaatcgga 127



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 23 attcgcttggtgcaggtcgggaac 46
          ||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39




>39832_aly-MIR168a:mirbase
          Length = 155

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 117 attggatcccgccttgcatcaactgaatcgga 148
           ||||||||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactgaatcgga 133



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 23 attcgcttggtgcaggtcgggaac 46
          ||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaac 45




>40271_bna-MIR168:mirbase
          Length = 133

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                   
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
          |||||| |||| | |||||||||||||||||||||||||||
Sbjct: 4  cggcggcctctgactcgcttggtgcaggtcgggaactgatt 44




>42742_zma-MIR168b:mirbase
          Length = 104

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
           ||||||||||||||||||| ||||||||||
Sbjct: 63  ggatcccgccttgcatcaagtgaatcggag 92




>42741_zma-MIR168a:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
           ||||||||||||||| ||| ||||||||||
Sbjct: 63  ggatcccgccttgcaccaagtgaatcggag 92




>42470_ssp-MIR168a:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
           ||||||||||||||| ||| ||||||||||
Sbjct: 60  ggatcccgccttgcaccaagtgaatcggag 89




>42460_sof-MIR168b:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
           ||||||||||||||| ||| ||||||||||
Sbjct: 62  ggatcccgccttgcaccaagtgaatcggag 91




>42459_sof-MIR168a:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
           ||||||||||||||| ||| ||||||||||
Sbjct: 63  ggatcccgccttgcaccaagtgaatcggag 92




>41962_osa-MIR168a:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
           ||||||||||||||| ||| ||||||||||
Sbjct: 55  ggatcccgccttgcaccaagtgaatcggag 84




>41961_osa-MIR168a:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
           ||||||||||||||| ||| ||||||||||
Sbjct: 55  ggatcccgccttgcaccaagtgaatcggag 84




>41888_hvu-MIR168:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
           ||||||||||||||| ||| ||||||||||
Sbjct: 66  ggatcccgccttgcaccaagtgaatcggag 95




>41887_hvu-MIR168:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
           ||||||||||||||| ||| ||||||||||
Sbjct: 66  ggatcccgccttgcaccaagtgaatcggag 95




>41753_bdi-MIR168:mirbase
          Length = 136

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 120 ggatcccgccttgcatcaactgaatcggag 149
           ||||||||||||||| ||| ||||||||||
Sbjct: 75  ggatcccgccttgcaccaagtgaatcggag 104