miRNEST 2.0, an integrative microRNA resource :: BLAST
>40334_rco-MIR156e:mirbase
Length = 95
Score = 97.6 bits (49), Expect = 2e-21
Identities = 84/93 (90%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 29 atgttgacagaagaaagagagcacaacccgccatt-ggccaaagagatcttcgccactgt 87
|||||||||||||| ||||||||||||||| |||| ||| |||||| |||| ||| |||
Sbjct: 2 atgttgacagaagagagagagcacaacccggcattaggctaaagag-tctttgcctttgt 60
Query: 88 tgggagtgtgctctctcttcttctgtcatcatc 120
||||||||||||||||| |||||||||||||||
Sbjct: 61 tgggagtgtgctctctcctcttctgtcatcatc 93
>40430_gma-MIR156f:mirbase
Length = 106
Score = 83.8 bits (42), Expect = 3e-17
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 27 tcatgttgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactg 86
|||||||||||||||| ||||||||||||||| | ||| |||| |||| ||| ||
Sbjct: 6 tcatgttgacagaagagagagagcacaacccgggaatggttaaaggagtctttgcctttg 65
Query: 87 ttgggagtgtgctctctcttcttctgtcatcatc 120
||||||||||||||||||||| ||||||||||||
Sbjct: 66 ttgggagtgtgctctctcttcctctgtcatcatc 99
>40426_gma-MIR156b:mirbase
Length = 120
Score = 83.8 bits (42), Expect = 3e-17
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 27 tcatgttgacagaagaaagagagcacaacccgccattggccaaagagatcttcgccactg 86
|||||||||||||||| ||||||||||||||| | |||| |||| |||| ||| ||
Sbjct: 15 tcatgttgacagaagagagagagcacaacccgggaatggctaaaggagtctttgcctttg 74
Query: 87 ttgggagtgtgctctctcttcttctgtcatcatc 120
|||||||||||| |||||||| ||||||||||||
Sbjct: 75 ttgggagtgtgccctctcttcctctgtcatcatc 108
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 75.8 bits (38), Expect = 8e-15
Identities = 81/94 (86%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 28 catgttgacagaagaaagagagcacaacccgccattggccaaagaga-tcttcgccactg 86
||||||||||||||| ||||||||||||||| ||| || ||||| | |||| || ||
Sbjct: 16 catgttgacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttg 75
Query: 87 ttgggagtgtgctctctcttcttctgtcatcatc 120
||||||||||||| ||||||||||||||| ||||
Sbjct: 76 ttgggagtgtgctttctcttcttctgtcaccatc 109
>41561_vvi-MIR156a:mirbase
Length = 104
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 87 ttgggagtgtgctctctcttcttctgtcatcatc 120
||||||||||||||||||||||||||||||||||
Sbjct: 64 ttgggagtgtgctctctcttcttctgtcatcatc 97
>41204_aqc-MIR529:mirbase
Length = 125
Score = 60.0 bits (30), Expect = 5e-10
Identities = 86/102 (84%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 20 tgagagatcatgttgacagaagaaagagagcacaacccgccattggccaaagaga-tctt 78
|||||||| |||||||||||||| |||||||||||||| ||| || ||||||| ||||
Sbjct: 6 tgagagat-atgttgacagaagagagagagcacaacccatcatcagctaaagagagtctt 64
Query: 79 cgccactgttgggagtgtgctctctcttcttctgtcatcatc 120
| ||||||||||||||||| | |||||||||||||||
Sbjct: 65 ttcttttgttgggagtgtgctctttgctcttctgtcatcatc 106
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 85 tgttgggagtgtgctctctcttcttctgtcatcatct 121
||||||||||||||||||| ||||||||||||||||
Sbjct: 75 tgttgggagtgtgctctctactcttctgtcatcatct 111
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 85 tgttgggagtgtgctctctcttcttctgtcatcatct 121
||||||||||||||||||| ||||||||||||||||
Sbjct: 71 tgttgggagtgtgctctctactcttctgtcatcatct 107
>40009_ath-MIR156h:mirbase
Length = 106
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 29 atgttgacagaagaaagagagcacaacc 56
||||||||||||||||||||||||||||
Sbjct: 8 atgttgacagaagaaagagagcacaacc 35
>39797_aly-MIR156h:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 29 atgttgacagaagaaagagagcacaacc 56
||||||||||||||||||||||||||||
Sbjct: 4 atgttgacagaagaaagagagcacaacc 31
>40427_gma-MIR156c:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcacaacc 56
||||||||||||| |||||||||||||
Sbjct: 144 tgttgacagaagatagagagcacaacc 170
>41914_osa-MIR156k:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 33 tgacagaagaaagagagcacaacccg 58
|||||||||| |||||||||||||||
Sbjct: 11 tgacagaagagagagagcacaacccg 36
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcacaac 55
||||||||||||| ||||||||||||
Sbjct: 9 tgttgacagaagatagagagcacaac 34
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcacaac 55
||||||||||||| ||||||||||||
Sbjct: 19 tgttgacagaagatagagagcacaac 44
>40335_rco-MIR156f:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcacaac 55
||||||||||||| ||||||||||||
Sbjct: 4 tgttgacagaagatagagagcacaac 29
>39728_smo-MIR156c:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 ttgacagaagaaagagagcaca 53
||||||||||||||||||||||
Sbjct: 11 ttgacagaagaaagagagcaca 32
>42687_zma-MIR156j:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 33 tgacagaagaaagagagcacaaccc 57
|||||||||| ||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 33 tgacagaagaaagagagcacaaccc 57
|||||||||| ||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 94 tgtgctctctcttcttctgtcatca 118
|||||||||| ||||||||||||||
Sbjct: 69 tgtgctctctattcttctgtcatca 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 94 tgtgctctctcttcttctgtcatca 118
|||||||||| ||||||||||||||
Sbjct: 79 tgtgctctctattcttctgtcatca 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcacaa 54
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcacaa 54
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41077_gra-MIR157b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>41076_gra-MIR157a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40431_gma-MIR156g:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 22 tgttgacagaagatagagagcaca 45
>40428_gma-MIR156d:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>40337_rco-MIR156h:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40011_ath-MIR157b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 17 tgttgacagaagatagagagcaca 40
>40010_ath-MIR157a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39799_aly-MIR157b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39798_aly-MIR157a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tgttgacagaagaaagagagcaca 53
||||||||||||| ||||||||||
Sbjct: 14 tgttgacagaagatagagagcaca 37
>39727_smo-MIR156b:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 95 gtgctctctcttcttctgtcatca 118
||||||||| ||||||||||||||
Sbjct: 80 gtgctctctattcttctgtcatca 103
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 33 tgacagaagaaagagagcacaacc 56
|||||||||| |||||||||||||
Sbjct: 3 tgacagaagatagagagcacaacc 26
