miRNEST 2.0, an integrative microRNA resource :: BLAST
>40108_ath-MIR408:mirbase
Length = 218
Score = 147 bits (74), Expect = 3e-36
Identities = 108/118 (91%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 28 aaagagggggccagggaagaggcagtgcatgggaagagaccaaacatagtcatttgatgt 87
|||||||| |||||||||||||||||||||||| |||||| ||||| |||| ||| ||||
Sbjct: 149 aaagagggagccagggaagaggcagtgcatgggtagagacaaaacagagtcgtttaatgt 90
Query: 88 tttggtaaaactcaatccatgctctgcttgttccctgtctctctctcgttaccacttt 145
||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 89 tttagtaaa-ctcaatccatgctctgcttgttccctgtctctctctcattaccgcttt 33
>39897_aly-MIR408:mirbase
Length = 211
Score = 139 bits (70), Expect = 7e-34
Identities = 98/106 (92%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 28 aaagagggggccagggaagaggcagtgcatgggaagagaccaaacatagtcatttgatgt 87
|||||||| |||||||||||||||||||||||| |||||| ||||| |||| ||| ||||
Sbjct: 146 aaagagggagccagggaagaggcagtgcatgggtagagacaaaacagagtcgtttaatgt 87
Query: 88 tttggtaaaactcaatccatgctctgcttgttccctgtctctctct 133
||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 86 tttagt-aaactcaatccatgctctgcttgttccctgtctctctct 42
>41683_vvi-MIR408:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatgggaagag 65
|||||||||||||||||||||||| ||||
Sbjct: 97 gccagggaagaggcagtgcatgggtagag 69
>41463_ptc-MIR408:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatgggaagag 65
|||||||||||||||||||||||| ||||
Sbjct: 96 gccagggaagaggcagtgcatgggtagag 68
>41252_csi-MIR408:mirbase
Length = 153
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||||||||
Sbjct: 140 gccagggaagaggcagtgcatggga 116
>41193_aqc-MIR408:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 37 gccagggaagaggcagtgcatgggaagag 65
||||||||||||||||||||||| |||||
Sbjct: 2 gccagggaagaggcagtgcatggaaagag 30
>40405_ahy-MIR408:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 26 agaaagagggggccagggaagaggcagtgcatg 58
|||||||| | ||||||||||||||||||||||
Sbjct: 112 agaaagagagagccagggaagaggcagtgcatg 80
>40404_ahy-MIR408:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 26 agaaagagggggccagggaagaggcagtgcatg 58
|||||||| | ||||||||||||||||||||||
Sbjct: 112 agaaagagagagccagggaagaggcagtgcatg 80
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatg 58
||||||||||||||||||||||
Sbjct: 113 gccagggaagaggcagtgcatg 92
>42830_zma-MIR408b:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 145 gccagggaagaggcagtgcagggga 121
>42829_zma-MIR408:mirbase
Length = 191
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 172 gccagggaagaggcagtgcagggga 148
>42600_sbi-MIR408:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 204 gccagggaagaggcagtgcagggga 180
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 246 gccagggaagaggcagtgcagggga 222
>42464_sof-MIR408c:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 267 gccagggaagaggcagtgcagggga 243
>42463_sof-MIR408b:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 267 gccagggaagaggcagtgcagggga 243
>42462_sof-MIR408a:mirbase
Length = 283
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 264 gccagggaagaggcagtgcagggga 240
>42052_osa-MIR408:mirbase
Length = 213
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatggga 61
|||||||||||||||||||| ||||
Sbjct: 173 gccagggaagaggcagtgcagggga 149
>40391_rco-MIR408:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcatgggaagag 65
|||||||||||||||||||| ||| ||||
Sbjct: 87 gccagggaagaggcagtgcaggggtagag 59
>39742_smo-MIR408:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcat 57
|||||||||||||||||||||
Sbjct: 96 gccagggaagaggcagtgcat 76
>39428_pta-MIR408:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgcat 57
|||||||||||||||||||||
Sbjct: 84 gccagggaagaggcagtgcat 64
>42647_tae-MIR408:mirbase
Length = 187
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgca 56
||||||||||||||||||||
Sbjct: 156 gccagggaagaggcagtgca 137
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgca 56
||||||||||||||||||||
Sbjct: 178 gccagggaagaggcagtgca 159
>42465_sof-MIR408d:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 37 gccagggaagaggcagtgca 56
||||||||||||||||||||
Sbjct: 196 gccagggaagaggcagtgca 177
