miRNEST 2.0, an integrative microRNA resource :: BLAST
>39832_aly-MIR168a:mirbase
Length = 155
Score = 137 bits (69), Expect = 3e-33
Identities = 116/128 (90%), Gaps = 4/128 (3%)
Strand = Plus / Plus
Query: 16 tcaccgtcgggctcggattcgcttggtgcaggtcggga-ctaattcg-ctgacacagcca 73
|||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||
Sbjct: 6 tcaccgtcgggctcggattcgcttggtgcaggtcgggaaccaattcggctgacacagcct 65
Query: 74 cgtggctctttttc--ttattggtttgtgagcagggattggatcccgccttgcatcaact 131
|||| || | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 cgtgactttaaaacctttattggtttgtgagcagggattggatcccgccttgcatcaact 125
Query: 132 gaatcgga 139
||||||||
Sbjct: 126 gaatcgga 133
>40043_ath-MIR168a:mirbase
Length = 138
Score = 135 bits (68), Expect = 1e-32
Identities = 115/127 (90%), Gaps = 4/127 (3%)
Strand = Plus / Plus
Query: 17 caccgtcgggctcggattcgcttggtgcaggtcggga-ctaattcg-ctgacacagccac 74
|||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||| |
Sbjct: 1 caccatcgggctcggattcgcttggtgcaggtcgggaaccaattcggctgacacagcctc 60
Query: 75 gtggctctttttc--ttattggtttgtgagcagggattggatcccgccttgcatcaactg 132
||| || || | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgacttttaaacctttattggtttgtgagcagggattggatcccgccttgcatcaactg 120
Query: 133 aatcgga 139
|||||||
Sbjct: 121 aatcgga 127
>40271_bna-MIR168:mirbase
Length = 133
Score = 73.8 bits (37), Expect = 4e-14
Identities = 89/104 (85%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 34 tcgcttggtgcaggtcggga-ctaattcgctgacacagccacgtggctctttttcttatt 92
|||||||||||||||||||| || ||| |||||||| ||||||||||| || | ||
Sbjct: 18 tcgcttggtgcaggtcgggaactgattggctgacaccgccacgtggct--ttccatggtt 75
Query: 93 ggtttgtgagcagggattggatcccgccttgcatcaactgaatc 136
|| |||||||||||||| ||||||||||||| ||||| ||||||
Sbjct: 76 ggcttgtgagcagggatcggatcccgccttgtatcaagtgaatc 119
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 65.9 bits (33), Expect = 9e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 108 attggatcccgccttgcatcaactgaatcggag 140
|||||||||||||||||||||||||||||||||
Sbjct: 103 attggatcccgccttgcatcaactgaatcggag 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 9 attcgcttggtgcaggtcggga 30
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 65.9 bits (33), Expect = 9e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 108 attggatcccgccttgcatcaactgaatcggag 140
|||||||||||||||||||||||||||||||||
Sbjct: 127 attggatcccgccttgcatcaactgaatcggag 159
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gattcgcttggtgcaggtcggga 53
|||||||||||||||||||||||
Sbjct: 8 gattcgcttggtgcaggtcggga 30
>41215_crt-MIR168:mirbase
Length = 201
Score = 65.9 bits (33), Expect = 9e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 108 attggatcccgccttgcatcaactgaatcggag 140
|||||||||||||||||||||||||||||||||
Sbjct: 136 attggatcccgccttgcatcaactgaatcggag 168
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 19 attcgcttggtgcaggtcggga 40
>41210_ccl-MIR168:mirbase
Length = 176
Score = 65.9 bits (33), Expect = 9e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 108 attggatcccgccttgcatcaactgaatcggag 140
|||||||||||||||||||||||||||||||||
Sbjct: 135 attggatcccgccttgcatcaactgaatcggag 167
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 18 attcgcttggtgcaggtcggga 39
>41101_tcc-MIR168:mirbase
Length = 167
Score = 65.9 bits (33), Expect = 9e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 108 attggatcccgccttgcatcaactgaatcggag 140
|||||||||||||||||||||||||||||||||
Sbjct: 120 attggatcccgccttgcatcaactgaatcggag 152
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 19 attcgcttggtgcaggtcggga 40
>40448_gma-MIR168:mirbase
Length = 125
Score = 65.9 bits (33), Expect = 9e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 108 attggatcccgccttgcatcaactgaatcggag 140
|||||||||||||||||||||||||||||||||
Sbjct: 81 attggatcccgccttgcatcaactgaatcggag 113
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcggga 38
>39833_aly-MIR168b:mirbase
Length = 176
Score = 61.9 bits (31), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 11 taaagtcaccgtcgggctcggattcgcttggtgcaggtcggga 53
|||||| |||| ||| |||||||||||||||||||||||||||
Sbjct: 20 taaagttaccggcggtctcggattcgcttggtgcaggtcggga 62
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggag 140
||||||| |||| ||||||||||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggag 138
>40355_rco-MIR168:mirbase
Length = 131
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 108 attggatcccgccttgcatcaactgaatcg 137
||||||||||||||||||||||||||||||
Sbjct: 99 attggatcccgccttgcatcaactgaatcg 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 4 attcgcttggtgcaggtcggga 25
>41596_vvi-MIR168:mirbase
Length = 132
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 112 gatcccgccttgcatcaactgaatcggag 140
|||||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggag 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 9 attcgcttggtgcaggtcggga 30
>40044_ath-MIR168b:mirbase
Length = 124
Score = 58.0 bits (29), Expect = 2e-09
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 18 accgtcgggctcggattcgcttggtgcaggtcggg-actaattcgctgacacagccacgt 76
|||| ||| |||||||||||||||||||||||||| ||| ||| |||||||| | |||||
Sbjct: 3 accggcggtctcggattcgcttggtgcaggtcgggaactgattggctgacaccgacacgt 62
Query: 77 g 77
|
Sbjct: 63 g 63
>42742_zma-MIR168b:mirbase
Length = 104
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 111 ggatcccgccttgcatcaactgaatcggagc 141
||||||||||||||||||| |||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggagc 93
>42741_zma-MIR168a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 ggatcccgccttgcatcaactgaatcggagc 141
||||||||||||||| ||| |||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggagc 93
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 ggatcccgccttgcatcaactgaatcggagc 141
||||||||||||||| ||| |||||||||||
Sbjct: 60 ggatcccgccttgcaccaagtgaatcggagc 90
>42460_sof-MIR168b:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 ggatcccgccttgcatcaactgaatcggagc 141
||||||||||||||| ||| |||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggagc 92
>42459_sof-MIR168a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 ggatcccgccttgcatcaactgaatcggagc 141
||||||||||||||| ||| |||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggagc 93
>41962_osa-MIR168a:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 ggatcccgccttgcatcaactgaatcggagc 141
||||||||||||||| ||| |||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggagc 85
>41961_osa-MIR168a:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 ggatcccgccttgcatcaactgaatcggagc 141
||||||||||||||| ||| |||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggagc 85
>41888_hvu-MIR168:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 ggatcccgccttgcatcaactgaatcggagc 141
||||||||||||||| ||| |||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggagc 96
>41887_hvu-MIR168:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 ggatcccgccttgcatcaactgaatcggagc 141
||||||||||||||| ||| |||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggagc 96
>41753_bdi-MIR168:mirbase
Length = 136
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 111 ggatcccgccttgcatcaactgaatcggagc 141
||||||||||||||| ||| |||||||||||
Sbjct: 75 ggatcccgccttgcaccaagtgaatcggagc 105
