miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40329_cpa-MIR162a:mirbase
          Length = 109

 Score = 75.8 bits (38), Expect = 7e-15
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                
Query: 4  aaagtcactggaggcagcggttcatcgatctcttcctg 41
          ||||||||||||||||||||||||||||||||||||||
Sbjct: 6  aaagtcactggaggcagcggttcatcgatctcttcctg 43



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 98  gatcgataaacctctgcatccagcg 122
           |||||||||||||||||||||||||
Sbjct: 78  gatcgataaacctctgcatccagcg 102




>41090_tcc-MIR162:mirbase
          Length = 131

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 4  aaagtcactggaggcagcggttcatcgatctcttcctg 41
          |||| |||||||||||||||||||||||||||||||||
Sbjct: 14 aaagacactggaggcagcggttcatcgatctcttcctg 51



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 98  gatcgataaacctctgcatccag 120
           |||||||||||||||||||||||
Sbjct: 89  gatcgataaacctctgcatccag 111




>41046_ghr-MIR162a:mirbase
          Length = 148

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 4  aaagtcactggaggcagcggttcatcgatctcttcctg 41
          |||| |||||||||||||||||||||||||||||||||
Sbjct: 17 aaagacactggaggcagcggttcatcgatctcttcctg 54



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 98  gatcgataaacctctgcatccagcg 122
           |||||||||||||||||||||||||
Sbjct: 92  gatcgataaacctctgcatccagcg 116




>40342_rco-MIR162:mirbase
          Length = 101

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 8  tcactggaggcagcggttcatcgatctcttcctg 41
          ||||||||||||||||||||||||||||||||||
Sbjct: 1  tcactggaggcagcggttcatcgatctcttcctg 34



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 98  gatcgataaacctctgcatccagcg 122
           |||||||||||||||||||||||||
Sbjct: 74  gatcgataaacctctgcatccagcg 98




>40024_ath-MIR162a:mirbase
          Length = 140

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 6  agtcactggaggcagcggttcatcgatctcttcctgtg 43
          |||| |||||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctgtg 57



 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 84  taaaagcacgaacagatcgataaacctctgcatccagcggttgcct 129
           |||||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 73  taaaagcatgaatagatcgataaacctctgcatccagcgtttgcct 118




>41578_vvi-MIR162:mirbase
          Length = 103

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                               
Query: 5  aagtcactggaggcagcggttcatcgatctcttcctg 41
          ||||||||||| |||||||||||||||||||||||||
Sbjct: 3  aagtcactggatgcagcggttcatcgatctcttcctg 39



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 100 tcgataaacctctgcatccagcg 122
           |||||||||||||||||||||||
Sbjct: 73  tcgataaacctctgcatccagcg 95




>41313_ptc-MIR162a:mirbase
          Length = 107

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 9  cactggaggcagcggttcatcgatctcttcctg 41
          |||||||||||||||||||||||||||||||||
Sbjct: 9  cactggaggcagcggttcatcgatctcttcctg 41



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 93  gaacagatcgataaacctctgcatccagcg 122
           |||| |||||||||||||||||||||||||
Sbjct: 71  gaaccgatcgataaacctctgcatccagcg 100




>40437_gma-MIR162:mirbase
          Length = 102

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                               
Query: 5  aagtcactggaggcagcggttcatcgatctcttcctg 41
          ||||||||||| |||||||||||||||||||||||||
Sbjct: 4  aagtcactggatgcagcggttcatcgatctcttcctg 40



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 98  gatcgataaacctctgcatccagcg 122
           |||||||||||||||||||||||||
Sbjct: 71  gatcgataaacctctgcatccagcg 95




>39812_aly-MIR162a:mirbase
          Length = 228

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 85  aaaagcacgaacagatcgataaacctctgcatccagcggttgcct 129
           ||||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 121 aaaagcatgaatagatcgataaacctctgcatccagcgtttgcct 165



 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                              
Query: 6  agtcactggaggcagcggttcatcgatctcttcctg 41
          |||| |||||||||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctg 98




>41315_ptc-MIR162c:mirbase
          Length = 107

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 9  cactggaggcagcggttcatcgatctcttcctg 41
          |||||||||||||||||||||||||| ||||||
Sbjct: 9  cactggaggcagcggttcatcgatcttttcctg 41



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 90  cacgaacagatcgataaacctctgcatccag 120
           ||||||| |||||||||||||||||||||||
Sbjct: 68  cacgaaccgatcgataaacctctgcatccag 98




>41314_ptc-MIR162b:mirbase
          Length = 107

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 9  cactggaggcagcggttcatcgatctcttcctg 41
          |||||||||||||||||||||||||| ||||||
Sbjct: 9  cactggaggcagcggttcatcgatcttttcctg 41



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 90  cacgaacagatcgataaacctctgcatccag 120
           ||||||| |||||||||||||||||||||||
Sbjct: 68  cacgaaccgatcgataaacctctgcatccag 98




>41220_csi-MIR162:mirbase
          Length = 201

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 5   aagtcactggaggcagcggttcatcgatc 33
           |||||||||||||||||||||||||||||
Sbjct: 83  aagtcactggaggcagcggttcatcgatc 111



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 98  gatcgataaacctctgcatccagcg 122
           |||||||||||||||||||||||||
Sbjct: 159 gatcgataaacctctgcatccagcg 183




>40663_mtr-MIR162:mirbase
          Length = 124

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 7  gtcactggaggcagcggttcatcgatctcttcctg 41
          ||||||||| |||||||||||||||||| ||||||
Sbjct: 17 gtcactggatgcagcggttcatcgatctgttcctg 51



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 100 tcgataaacctctgcatccagcg 122
           |||||||||||||||||||||||
Sbjct: 87  tcgataaacctctgcatccagcg 109



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 93  gaacagatcgataaacctctgcatccag 120
           |||||||||||| |||| ||||||||||
Sbjct: 48  gaacagatcgatgaaccgctgcatccag 21




>40025_ath-MIR162b:mirbase
          Length = 111

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 5  aagtcactggaggcagcggttcatcgatctcttcctgtg 43
          ||||| |||||||||||||||||||||||  ||||||||
Sbjct: 6  aagtcgctggaggcagcggttcatcgatcaattcctgtg 44



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 85  aaaagcacgaacagatcgataaacctctgcatccagcg 122
           ||||||| |||  |||||||||||||||||||||||||
Sbjct: 64  aaaagcaagaatcgatcgataaacctctgcatccagcg 101




>39813_aly-MIR162b:mirbase
          Length = 184

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 5  aagtcactggaggcagcggttcatcgatctcttcctgtg 43
          ||||| |||||||||||||||||||||||  ||||||||
Sbjct: 44 aagtcgctggaggcagcggttcatcgatcaattcctgtg 82



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 85  aaaagcacgaacagatcgataaacctctgcatccagcg 122
           ||||||| |||  |||||||||||||||||||||||||
Sbjct: 98  aaaagcatgaatcgatcgataaacctctgcatccagcg 135




>42502_sbi-MIR162:mirbase
          Length = 127

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 98  gatcgataaacctctgcatccag 120
           |||||||||||||||||||||||
Sbjct: 105 gatcgataaacctctgcatccag 127




>41929_osa-MIR162a:mirbase
          Length = 171

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 98  gatcgataaacctctgcatccag 120
           |||||||||||||||||||||||
Sbjct: 141 gatcgataaacctctgcatccag 163




>42708_zma-MIR162:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 100 tcgataaacctctgcatccag 120
           |||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130




>41736_bdi-MIR162:mirbase
          Length = 133

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  gatcgataaacctctgcatcc 118
           |||||||||||||||||||||
Sbjct: 109 gatcgataaacctctgcatcc 129




>41530_sly-MIR162:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 100 tcgataaacctctgcatccag 120
           |||||||||||||||||||||
Sbjct: 79  tcgataaacctctgcatccag 99