miRNEST 2.0, an integrative microRNA resource :: BLAST
>40325_bra-MIR824:mirbase
Length = 632
Score = 75.8 bits (38), Expect = 3e-14
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 355 ggagtgggggaggtgctggattatttc-cccttctcatcgatggtctagatttgcgaggt 413
||||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 559 ggagtggggaaggtgctgggttattagtcccttctcatcgatggtctagatgtgcgaggt 618
Query: 414 gactct 419
||||||
Sbjct: 619 gactct 624
Score = 65.9 bits (33), Expect = 2e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 11 ctcgagttgtctctcatatctagaccatttgtgagaaggggtttt 55
|||||||||||| |||| |||||||||||||||||||||| ||||
Sbjct: 2 ctcgagttgtctttcatgtctagaccatttgtgagaagggatttt 46
>40300_bna-MIR824:mirbase
Length = 632
Score = 75.8 bits (38), Expect = 3e-14
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 355 ggagtgggggaggtgctggattatttc-cccttctcatcgatggtctagatttgcgaggt 413
||||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 559 ggagtggggaaggtgctgggttattagtcccttctcatcgatggtctagatgtgcgaggt 618
Query: 414 gactct 419
||||||
Sbjct: 619 gactct 624
Score = 65.9 bits (33), Expect = 2e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 11 ctcgagttgtctctcatatctagaccatttgtgagaaggggtttt 55
|||||||||||| |||| |||||||||||||||||||||| ||||
Sbjct: 2 ctcgagttgtctttcatgtctagaccatttgtgagaagggatttt 46
>40309_bol-MIR824:mirbase
Length = 634
Score = 71.9 bits (36), Expect = 4e-13
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 355 ggagtggggga-ggtgctggattatt-tccccttctcatcgatggtctagatttgcgagg 412
||||||||||| |||||||| |||| | ||||||||||||||||||||||| |||||||
Sbjct: 560 ggagtgggggaaggtgctgggntattattcccttctcatcgatggtctagatgtgcgagg 619
Query: 413 tgactct 419
|||||||
Sbjct: 620 tgactct 626
Score = 65.9 bits (33), Expect = 2e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 11 ctcgagttgtctctcatatctagaccatttgtgagaaggggtttt 55
|||||||||||| |||| |||||||||||||||||||||| ||||
Sbjct: 2 ctcgagttgtctttcatgtctagaccatttgtgagaagggatttt 46
Score = 58.0 bits (29), Expect = 6e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 232 ggacatacattttccctaagagatgccaaacttctgtctggagtg 276
||||| ||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 434 ggacagacattttgcctaagagatgtcaaacctctgtctggagtg 478
>40142_ath-MIR824:mirbase
Length = 689
Score = 67.9 bits (34), Expect = 6e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 382 cccttctcatcgatggtctagatttgcgaggtgactct 419
||||||||||||||||||||||| ||||||||||||||
Sbjct: 627 cccttctcatcgatggtctagatgtgcgaggtgactct 664
Score = 65.9 bits (33), Expect = 2e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 14 gagttgtctctcatatctagaccatttgtgagaaggg 50
|||||||||||||| ||||||||||||||||||||||
Sbjct: 18 gagttgtctctcatgtctagaccatttgtgagaaggg 54
>39907_aly-MIR824:mirbase
Length = 654
Score = 65.9 bits (33), Expect = 2e-11
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 361 ggggaggtgctggattatttccccttctcatcgatggtctagatttgcgaggtgact 417
||||||||| | | |||| | ||||||||||||||||||||||| ||||||||||||
Sbjct: 598 ggggaggtgtttggttatattcccttctcatcgatggtctagatgtgcgaggtgact 654
Score = 63.9 bits (32), Expect = 1e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 15 agttgtctctcatatctagaccatttgtgagaaggg 50
||||||||||||| ||||||||||||||||||||||
Sbjct: 1 agttgtctctcatgtctagaccatttgtgagaaggg 36
