miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40325_bra-MIR824:mirbase
          Length = 632

 Score = 73.8 bits (37), Expect = 1e-13
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                       
Query: 11 ctcgagttgtctctcatgtctagaccatttgtgagaaggggtttt 55
          |||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 2  ctcgagttgtctttcatgtctagaccatttgtgagaagggatttt 46



 Score = 67.9 bits (34), Expect = 6e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 384 cccttctcatcgatggtctagatttgcgaggtgactct 421
           ||||||||||||||||||||||| ||||||||||||||
Sbjct: 587 cccttctcatcgatggtctagatgtgcgaggtgactct 624



 Score = 48.1 bits (24), Expect = 6e-06
 Identities = 90/110 (81%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                       
Query: 232 ggacatacattttctctaagagatgccaaacttctgtctggagtg---gagctttctcgt 288
           ||||| |||||||  ||| |||||| ||||| |||||||||||||   ||| | | || |
Sbjct: 433 ggacagacatttttcctacgagatgtcaaacctctgtctggagtgttagaggtatttcat 492

                                                             
Query: 289 gatagctcataatttgtagcttgcacaacttaagctacactagtttactt 338
           ||||||| | || ||| | ||||||| |||| ||||||||||||||||||
Sbjct: 493 gatagctaagaacttgaatcttgcactactt-agctacactagtttactt 541




>40309_bol-MIR824:mirbase
          Length = 634

 Score = 73.8 bits (37), Expect = 1e-13
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                       
Query: 11 ctcgagttgtctctcatgtctagaccatttgtgagaaggggtttt 55
          |||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 2  ctcgagttgtctttcatgtctagaccatttgtgagaagggatttt 46



 Score = 67.9 bits (34), Expect = 6e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 384 cccttctcatcgatggtctagatttgcgaggtgactct 421
           ||||||||||||||||||||||| ||||||||||||||
Sbjct: 589 cccttctcatcgatggtctagatgtgcgaggtgactct 626



 Score = 50.1 bits (25), Expect = 1e-06
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 232 ggacatacattttctctaagagatgccaaacttctgtctggagtg 276
           ||||| |||||||  |||||||||| ||||| |||||||||||||
Sbjct: 434 ggacagacattttgcctaagagatgtcaaacctctgtctggagtg 478




>40300_bna-MIR824:mirbase
          Length = 632

 Score = 73.8 bits (37), Expect = 1e-13
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                       
Query: 11 ctcgagttgtctctcatgtctagaccatttgtgagaaggggtttt 55
          |||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 2  ctcgagttgtctttcatgtctagaccatttgtgagaagggatttt 46



 Score = 67.9 bits (34), Expect = 6e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 384 cccttctcatcgatggtctagatttgcgaggtgactct 421
           ||||||||||||||||||||||| ||||||||||||||
Sbjct: 587 cccttctcatcgatggtctagatgtgcgaggtgactct 624



 Score = 48.1 bits (24), Expect = 6e-06
 Identities = 90/110 (81%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                       
Query: 232 ggacatacattttctctaagagatgccaaacttctgtctggagtg---gagctttctcgt 288
           ||||| |||||||  ||| |||||| ||||| |||||||||||||   ||| | | || |
Sbjct: 433 ggacagacatttttcctacgagatgtcaaacctctgtctggagtgttagaggtatttcat 492

                                                             
Query: 289 gatagctcataatttgtagcttgcacaacttaagctacactagtttactt 338
           ||||||| | || ||| | ||||||| |||| ||||||||||||||||||
Sbjct: 493 gatagctaagaacttgaatcttgcactactt-agctacactagtttactt 541




>40142_ath-MIR824:mirbase
          Length = 689

 Score = 73.8 bits (37), Expect = 1e-13
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                               
Query: 14 gagttgtctctcatgtctagaccatttgtgagaaggg 50
          |||||||||||||||||||||||||||||||||||||
Sbjct: 18 gagttgtctctcatgtctagaccatttgtgagaaggg 54



 Score = 67.9 bits (34), Expect = 6e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 384 cccttctcatcgatggtctagatttgcgaggtgactct 421
           ||||||||||||||||||||||| ||||||||||||||
Sbjct: 627 cccttctcatcgatggtctagatgtgcgaggtgactct 664




>39907_aly-MIR824:mirbase
          Length = 654

 Score = 71.9 bits (36), Expect = 4e-13
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                              
Query: 15 agttgtctctcatgtctagaccatttgtgagaaggg 50
          ||||||||||||||||||||||||||||||||||||
Sbjct: 1  agttgtctctcatgtctagaccatttgtgagaaggg 36



 Score = 63.9 bits (32), Expect = 1e-10
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                               
Query: 384 cccttctcatcgatggtctagatttgcgaggtgact 419
           ||||||||||||||||||||||| ||||||||||||
Sbjct: 619 cccttctcatcgatggtctagatgtgcgaggtgact 654