miRNEST 2.0, an integrative microRNA resource :: BLAST
>40322_bra-MIR171e:mirbase
Length = 119
Score = 77.8 bits (39), Expect = 2e-15
Identities = 97/115 (84%), Gaps = 6/115 (5%)
Strand = Plus / Plus
Query: 10 agagtcctctttgatattggcctggttcattcagatcttcccgaccaaaccacgcaaca- 68
||||||||||||||||||||||||||||| ||||||||||| || | | |||| | |
Sbjct: 6 agagtcctctttgatattggcctggttcactcagatcttccagattaca-cacgtactat 64
Query: 69 ----actctcttagatatctgattgagccgcgtcaatatctcagtgctctctcgt 119
| ||||| || ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 65 atacattctctcagttatctgattgagccgcgccaatatctcagtgctctctcgt 119
>40290_bna-MIR171f:mirbase
Length = 119
Score = 77.8 bits (39), Expect = 2e-15
Identities = 97/115 (84%), Gaps = 6/115 (5%)
Strand = Plus / Plus
Query: 10 agagtcctctttgatattggcctggttcattcagatcttcccgaccaaaccacgcaaca- 68
||||||||||||||||||||||||||||| ||||||||||| || | | |||| | |
Sbjct: 6 agagtcctctttgatattggcctggttcactcagatcttccagattaca-cacgtactat 64
Query: 69 ----actctcttagatatctgattgagccgcgtcaatatctcagtgctctctcgt 119
| ||||| || ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 65 atacattctctcagttatctgattgagccgcgccaatatctcagtgctctctcgt 119
>39849_aly-MIR171a:mirbase
Length = 198
Score = 71.9 bits (36), Expect = 1e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 80 tatctgattgagccgcgtcaatatctcagtgctctctcgtctct 123
||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 126 tatctgattgagccgcgccaatatctcagtactctctcgtctct 169
Score = 67.9 bits (34), Expect = 2e-12
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 2 agcactagagagtcctctttgatattggcctggttcattcagatcttccc 51
||||| ||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 38 agcacgagagagtcc-ctttgatattggcctggttcactcagatcttccc 86
>40060_ath-MIR171a:mirbase
Length = 123
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 80 tatctgattgagccgcgtcaatatctcagtgctctctcgt 119
||||||||||||||||| |||||||||||| |||||||||
Sbjct: 84 tatctgattgagccgcgccaatatctcagtactctctcgt 123
Score = 58.0 bits (29), Expect = 2e-09
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 8 agagagtcctctttgatattggcctggttcattcagatctt 48
||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 4 agagagtcc-ctttgatattggcctggttcactcagatctt 43
>39848_aly-MIR170:mirbase
Length = 212
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 81 atctgattgagccgcgtcaatatctcagtgctctctcgtc 120
|||||||||||||| |||||||||||||| ||||||||||
Sbjct: 114 atctgattgagccgtgtcaatatctcagtcctctctcgtc 153
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 8 agagagtcctctttgatattggcctggttcattcagat 45
||||||||| || |||||||||||||||||| ||||||
Sbjct: 62 agagagtcc-ctctgatattggcctggttcactcagat 98
>40059_ath-MIR170:mirbase
Length = 93
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 81 atctgattgagccgcgtcaatatctcagtgctctctcg 118
|||||||||||||| |||||||||||||| ||||||||
Sbjct: 56 atctgattgagccgtgtcaatatctcagtcctctctcg 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 8 agagagtcctctttgatattggcctggttcattcagat 45
||||||||| || |||||||||||||||||| ||||||
Sbjct: 3 agagagtcc-ctctgatattggcctggttcactcagat 39
>40291_bna-MIR171g:mirbase
Length = 80
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 71 tctcttagatatctgattgagccgcgtcaatatctc 106
|||||||| ||||||||||||||||| |||||||||
Sbjct: 45 tctcttagttatctgattgagccgcgccaatatctc 80
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 gatattggcctggttcattcagat 45
||||||||||||||||| ||||||
Sbjct: 1 gatattggcctggttcactcagat 24
>42640_tae-MIR171a:mirbase
Length = 130
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 82 tctgattgagccgcgtcaatatctcagtgctct 114
||||||||||||| | |||||||||||||||||
Sbjct: 87 tctgattgagccgtgccaatatctcagtgctct 119
>41981_osa-MIR171a:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 tatctgattgagccgcgtcaatatctc 106
||||||||||||||||| |||||||||
Sbjct: 63 tatctgattgagccgcgccaatatctc 89
>41623_vvi-MIR171b:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgcgtcaatatctc 106
|||||||||||||||||||||||
Sbjct: 69 tgattgagccgcgtcaatatctc 91
>41538_sly-MIR171a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 18 ctttgatattggcctggttcattcaga 44
||||||||||||||||||||| |||||
Sbjct: 12 ctttgatattggcctggttcactcaga 38
>42774_zma-MIR171n:mirbase
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 80 tatctgattgagccgcgtcaatatct 105
||||||||||||||||| ||||||||
Sbjct: 53 tatctgattgagccgcgccaatatct 78
>42553_sbi-MIR171h:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 gattgagccgcgtcaatatctc 106
||||||||||||||||||||||
Sbjct: 60 gattgagccgcgtcaatatctc 81
>41989_osa-MIR171i:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 gattgagccgcgtcaatatctc 106
||||||||||||||||||||||
Sbjct: 89 gattgagccgcgtcaatatctc 110
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 tgatattggcctggttcattcagatc 46
|||||||||||||||||| |||||||
Sbjct: 10 tgatattggcctggttcactcagatc 35
>40696_mtr-MIR171b:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgcgtcaatatct 105
||||||||||||||||||||||
Sbjct: 69 tgattgagccgcgtcaatatct 90
>42773_zma-MIR171m:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 gattgagccgcgtcaatatct 105
|||||||||||||||||||||
Sbjct: 62 gattgagccgcgtcaatatct 82
>42772_zma-MIR171l:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 gattgagccgcgtcaatatct 105
|||||||||||||||||||||
Sbjct: 58 gattgagccgcgtcaatatct 78
>42764_zma-MIR171d:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 82 tctgattgagccgcgtcaatatctcagtgctct 114
||||||||||||| | |||||||||||| ||||
Sbjct: 80 tctgattgagccgtgccaatatctcagtactct 112
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 80 tatctgattgagccgcgtcaatatc 104
||||||||||||||||| |||||||
Sbjct: 53 tatctgattgagccgcgccaatatc 77
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 82 tctgattgagccgcgtcaatatctcagtgctct 114
||||||||||||| | |||||||||||| ||||
Sbjct: 112 tctgattgagccgtgccaatatctcagtactct 144
>41985_osa-MIR171e:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 82 tctgattgagccgcgtcaatatctcagtgctct 114
||||||||||||| | |||||||| ||||||||
Sbjct: 87 tctgattgagccgtgccaatatcttagtgctct 119
>41890_hvu-MIR171:mirbase
Length = 173
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 82 tctgattgagccgcgtcaatatctcagtgctct 114
||||||||||||| | |||||||| ||||||||
Sbjct: 110 tctgattgagccgtgccaatatcttagtgctct 142
>41281_ctr-MIR171:mirbase
Length = 371
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 attgagccgcgtcaatatctc 106
|||||||||||||||||||||
Sbjct: 103 attgagccgcgtcaatatctc 123
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 82 tctgattgagccgcgtcaatatctcagtgctc 113
||||||||||||| | |||||||| |||||||
Sbjct: 99 tctgattgagccgtgccaatatcttagtgctc 130
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgatattggcctggttcattcaga 44
|||||||||||||||||| |||||
Sbjct: 20 tgatattggcctggttcactcaga 43
>40364_rco-MIR171f:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgatattggcctggttcattcaga 44
|||||||||||||||||| |||||
Sbjct: 3 tgatattggcctggttcactcaga 26
