miRNEST 2.0, an integrative microRNA resource :: BLAST
>40296_bna-MIR396a:mirbase
Length = 117
Score = 71.9 bits (36), Expect = 1e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaacttcctttttcatttcccttctttta 47
||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 1 ttccacagctttcttgaactttctttttcatttcccttatttta 44
>39878_aly-MIR396b:mirbase
Length = 188
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 1 tttttccacagctttcttgaacttcctttttcatttcc 38
|||||||||||||||||||||||| |||||||||||||
Sbjct: 29 tttttccacagctttcttgaactttctttttcatttcc 66
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 107 gctcaagaaagctgtgggaaaacatg 132
||||||||||||||||||||||||||
Sbjct: 135 gctcaagaaagctgtgggaaaacatg 160
>40086_ath-MIR396b:mirbase
Length = 135
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaacttcctttttcatttcc 38
||||||||||||||||||||||| |||||||||||||
Sbjct: 9 ttttccacagctttcttgaactttctttttcatttcc 45
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 107 gctcaagaaagctgtgggaaaacatg 132
||||||||||||||||||||||||||
Sbjct: 107 gctcaagaaagctgtgggaaaacatg 132
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaacttcctt 28
|||||||||||||||||||||||||||
Sbjct: 9 ttttccacagctttcttgaacttcctt 35
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tttttccacagctttcttgaacttcct 27
|||||||||||||||||||||||||||
Sbjct: 8 tttttccacagctttcttgaacttcct 34
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 109 tcaagaaagctgtgggaaaacatg 132
||||||||||||||| ||||||||
Sbjct: 27 tcaagaaagctgtggaaaaacatg 4
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 107 gctcaagaaagctgtgggaaaacatg 132
||||||||||||||||||||||||||
Sbjct: 112 gctcaagaaagctgtgggaaaacatg 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaacttccttt 29
||||||||||||||||||||||| ||||
Sbjct: 19 ttttccacagctttcttgaactttcttt 46
>39379_pab-MIR396a:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 107 gctcaagaaagctgtgggaaaacatg 132
||||||||||||||||||||||||||
Sbjct: 65 gctcaagaaagctgtgggaaaacatg 90
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
>41243_csi-MIR396c:mirbase
Length = 178
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tttttccacagctttcttgaacttc 25
|||||||||||||||||||||||||
Sbjct: 10 tttttccacagctttcttgaacttc 34
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 109 tcaagaaagctgtgggaaaacatgtcagg 137
||||||||||||||| |||||||| ||||
Sbjct: 29 tcaagaaagctgtggaaaaacatgacagg 1
>41212_ccl-MIR396:mirbase
Length = 277
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaacttcc 26
|||||||||||||||||||||||||
Sbjct: 141 ttttccacagctttcttgaacttcc 165
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 107 gctcaagaaagctgtgggaaaacatg 132
||||||||||||||||||| ||||||
Sbjct: 234 gctcaagaaagctgtgggagaacatg 259
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 tttccacagctttcttgaacttcc 26
||||||||||||||||||||||||
Sbjct: 31 tttccacagctttcttgaacttcc 54
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaacttc 25
||||||||||||||||||||||||
Sbjct: 12 ttttccacagctttcttgaacttc 35
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 6 ccacagctttcttgaacttc 25
||||||||||||||||||||
Sbjct: 95 ccacagctttcttgaacttc 76
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 109 tcaagaaagctgtgggaaaacatg 132
||||||||||||||||||| ||||
Sbjct: 81 tcaagaaagctgtgggaaaccatg 104
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaacttc 25
||||||||||||||||||||||||
Sbjct: 9 ttttccacagctttcttgaacttc 32
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 107 gctcaagaaagctgtgggaaaacatg 132
||||||||||||||||||| ||||||
Sbjct: 119 gctcaagaaagctgtgggagaacatg 144
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaacttc 25
||||||||||||||||||||||||
Sbjct: 4 ttttccacagctttcttgaacttc 27
>40476_gma-MIR396d:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaacttc 25
||||||||||||||||||||||||
Sbjct: 9 ttttccacagctttcttgaacttc 32
>40475_gma-MIR396c:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaacttc 25
||||||||||||||||||||||||
Sbjct: 19 ttttccacagctttcttgaacttc 42
>40474_gma-MIR396b:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaacttc 25
||||||||||||||||||||||||
Sbjct: 19 ttttccacagctttcttgaacttc 42
>40379_rco-MIR396:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaacttc 25
||||||||||||||||||||||||
Sbjct: 4 ttttccacagctttcttgaacttc 27
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 109 tcaagaaagctgtgggaaaacatg 132
||||||||||||||||| ||||||
Sbjct: 101 tcaagaaagctgtgggagaacatg 124
>42812_zma-MIR396f:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 tttccacagctttcttgaacttc 25
|||||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaacttc 23
>42811_zma-MIR396e:mirbase
Length = 166
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 tttccacagctttcttgaacttc 25
|||||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaacttc 23
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 tttccacagctttcttgaacttc 25
|||||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaacttc 42
>42028_osa-MIR396c:mirbase
Length = 141
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 tttccacagctttcttgaacttc 25
|||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaacttc 32
>41242_csi-MIR396b:mirbase
Length = 134
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tttttccacagctttcttgaact 23
|||||||||||||||||||||||
Sbjct: 17 tttttccacagctttcttgaact 39
>39426_pta-MIR396:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaactt 24
|||||||||||||||||||||||
Sbjct: 15 ttttccacagctttcttgaactt 37
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaacttcctttttca 33
|||||||||||||||||||| | |||||||
Sbjct: 11 ttccacagctttcttgaactgcatttttca 40
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaact 23
||||||||||||||||||||||
Sbjct: 12 ttttccacagctttcttgaact 33
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaacttc 25
||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttc 42
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 2 ttttccacagctttcttgaacttc 25
|||||||| |||||||||||||||
Sbjct: 126 ttttccacggctttcttgaacttc 103
>41141_tcc-MIR396d:mirbase
Length = 182
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 107 gctcaagaaagctgtgggaaaacatg 132
|||||||||||| |||||||||||||
Sbjct: 142 gctcaagaaagccgtgggaaaacatg 167
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 ttttccacagctttcttgaact 23
||||||||||||||||||||||
Sbjct: 19 ttttccacagctttcttgaact 40
>39381_pab-MIR396c:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tttttccacagctttcttgaacttcc 26
||||||||| ||||||||||||||||
Sbjct: 22 tttttccacggctttcttgaacttcc 47
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaactt 24
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>42814_zma-MIR396h:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaact 79
>42813_zma-MIR396g:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaact 92
>42808_zma-MIR396b:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42807_zma-MIR396a:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42472_ssp-MIR396:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>42461_sof-MIR396:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42027_osa-MIR396b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>42026_osa-MIR396a:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41241_csi-MIR396a:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 2 ttttccacagctttcttgaa 21
||||||||||||||||||||
Sbjct: 109 ttttccacagctttcttgaa 90
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40646_lja-MIR396:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
>40477_gma-MIR396e:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaact 26
>40473_gma-MIR396a:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40085_ath-MIR396a:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39877_aly-MIR396a:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttccacagctttcttgaact 23
||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaact 43
>39741_smo-MIR396:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 6 ccacagctttcttgaacttc 25
||||||||||||||||||||
Sbjct: 153 ccacagctttcttgaacttc 134
