miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42584_sbi-MIR396c:mirbase
          Length = 162

 Score = 93.7 bits (47), Expect = 3e-20
 Identities = 50/51 (98%)
 Strand = Plus / Plus

                                                             
Query: 3  ttcaagtccatgccatgcctttccacagctttcttgaacttcttctcctcc 53
          ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1  ttcaagtccatgccatgcctttccacagctttcttgaacttctcctcctcc 51



 Score = 85.7 bits (43), Expect = 8e-18
 Identities = 43/43 (100%)
 Strand = Plus / Plus

                                                      
Query: 101 aagaaggtcaagaaagctgtgggaagaaatgacataacaagga 143
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aagaaggtcaagaaagctgtgggaagaaatgacataacaagga 162




>41795_bdi-MIR396e:mirbase
          Length = 201

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 7  agtccatgccatgcctttccacagctttcttgaacttc 44
          |||||||||||| |||||||||||||||||||||||||
Sbjct: 16 agtccatgccattcctttccacagctttcttgaacttc 53



 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 106 ggtcaagaaagctgtgggaagaaatgacataacaaggact 145
           |||||||||||||||||||||||||| |||||| ||||||
Sbjct: 143 ggtcaagaaagctgtgggaagaaatggcataaccaggact 182




>41661_vvi-MIR396b:mirbase
          Length = 108

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 13 tgccatgcctttccacagctttcttgaacttcttctcc 50
          |||||||| |||||||||||||||||||||||||||||
Sbjct: 4  tgccatgcttttccacagctttcttgaacttcttctcc 41



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 25 ccacagctttcttgaacttc 44
          ||||||||||||||||||||
Sbjct: 95 ccacagctttcttgaacttc 76




>42028_osa-MIR396c:mirbase
          Length = 141

 Score = 65.9 bits (33), Expect = 8e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 13 tgccatgcctttccacagctttcttgaacttct 45
          |||||||||||||||||||||||||||||||||
Sbjct: 1  tgccatgcctttccacagctttcttgaacttct 33



 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 100 gaagaaggtcaagaaagctgtgggaagaaatg 131
           ||||| ||||||||||||||||||||||||||
Sbjct: 107 gaagagggtcaagaaagctgtgggaagaaatg 138




>42812_zma-MIR396f:mirbase
          Length = 117

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 22 tttccacagctttcttgaacttcttct 48
          |||||||||||||||||||||||||||
Sbjct: 1  tttccacagctttcttgaacttcttct 27



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 103 gaaggtcaagaaagctgtgggaaga 127
           |||||||||||||||||||||||||
Sbjct: 93  gaaggtcaagaaagctgtgggaaga 117




>42811_zma-MIR396e:mirbase
          Length = 166

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 22 tttccacagctttcttgaacttcttct 48
          |||||||||||||||||||||||||||
Sbjct: 1  tttccacagctttcttgaacttcttct 27



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 99  cgaagaaggtcaagaaagctgtgggaaga 127
           ||||||||||||||||||| |||||||||
Sbjct: 138 cgaagaaggtcaagaaagccgtgggaaga 166




>41439_ptc-MIR396e:mirbase
          Length = 145

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 16 catgcctttccacagctttcttgaacttctt 46
          ||||| |||||||||||||||||||||||||
Sbjct: 4  catgcttttccacagctttcttgaacttctt 34




>40476_gma-MIR396d:mirbase
          Length = 108

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 16 catgcctttccacagctttcttgaacttctt 46
          ||||| |||||||||||||||||||||||||
Sbjct: 4  catgcttttccacagctttcttgaacttctt 34




>40474_gma-MIR396b:mirbase
          Length = 126

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 16 catgcctttccacagctttcttgaacttctt 46
          ||||| |||||||||||||||||||||||||
Sbjct: 14 catgcttttccacagctttcttgaacttctt 44




>40379_rco-MIR396:mirbase
          Length = 124

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 22 tttccacagctttcttgaacttcttct 48
          |||||||||||||||||||||||||||
Sbjct: 5  tttccacagctttcttgaacttcttct 31



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 25  ccacagctttcttgaacttcttct 48
           ||||||||||||||||||| ||||
Sbjct: 115 ccacagctttcttgaacttattct 92




>41140_tcc-MIR396c:mirbase
          Length = 152

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 14 gccatgcctttccacagctttcttgaactt 43
          ||||||| ||||||||||||||||||||||
Sbjct: 12 gccatgcttttccacagctttcttgaactt 41




>40475_gma-MIR396c:mirbase
          Length = 117

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 17 atgcctttccacagctttcttgaacttctt 46
          |||| |||||||||||||||||||||||||
Sbjct: 15 atgcttttccacagctttcttgaacttctt 44




>41438_ptc-MIR396d:mirbase
          Length = 154

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 16 catgcctttccacagctttcttgaacttc 44
          ||||| |||||||||||||||||||||||
Sbjct: 4  catgcttttccacagctttcttgaacttc 32




>41243_csi-MIR396c:mirbase
          Length = 178

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 22 tttccacagctttcttgaacttctt 46
          |||||||||||||||||||||||||
Sbjct: 12 tttccacagctttcttgaacttctt 36



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 102 agaaggtcaagaaagctgtgggaagaaatg 131
           ||||| |||||||| |||||||||||||||
Sbjct: 144 agaagttcaagaaatctgtgggaagaaatg 173




>41212_ccl-MIR396:mirbase
          Length = 277

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 16  catgcctttccacagctttcttgaacttc 44
           ||||| |||||||||||||||||||||||
Sbjct: 136 catgcttttccacagctttcttgaacttc 164




>40726_mtr-MIR396a:mirbase
          Length = 93

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 22 tttccacagctttcttgaacttctt 46
          |||||||||||||||||||||||||
Sbjct: 5  tttccacagctttcttgaacttctt 29




>41437_ptc-MIR396c:mirbase
          Length = 102

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 13 tgccatgcctttccacagctttcttgaacttc 44
          |||||||  |||||||||||||||||||||||
Sbjct: 1  tgccatgtttttccacagctttcttgaacttc 32



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 23 ttccacagctttcttgaacttctt 46
          |||||| |||||||||||||||||
Sbjct: 94 ttccacggctttcttgaacttctt 71




>41660_vvi-MIR396a:mirbase
          Length = 116

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 16 catgcctttccacagctttcttgaact 42
          ||||| |||||||||||||||||||||
Sbjct: 7  catgcttttccacagctttcttgaact 33




>41142_tcc-MIR396e:mirbase
          Length = 146

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 23 ttccacagctttcttgaacttct 45
          |||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttct 43



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 16  catgcctttccacagctttcttgaacttct 45
           ||||| ||||||| ||||||||||||||||
Sbjct: 131 catgcttttccacggctttcttgaacttct 102




>39878_aly-MIR396b:mirbase
          Length = 188

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 100 gaagaaggtcaagaaagctgtgggaagaaatgaca 134
           ||||||| |||||||||||||||||| | ||||||
Sbjct: 129 gaagaagctcaagaaagctgtgggaaaacatgaca 163



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tttccacagctttcttgaactt 43
          ||||||||||||||||||||||
Sbjct: 31 tttccacagctttcttgaactt 52



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 25  ccacagctttcttgaacttcttct 48
           ||||||||||||||| ||||||||
Sbjct: 151 ccacagctttcttgagcttcttct 128




>40086_ath-MIR396b:mirbase
          Length = 135

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tttccacagctttcttgaactt 43
          ||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaactt 31



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 103 gaaggtcaagaaagctgtgggaagaaatgaca 134
           |||| |||||||||||||||||| | ||||||
Sbjct: 104 gaagctcaagaaagctgtgggaaaacatgaca 135




>39426_pta-MIR396:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tttccacagctttcttgaactt 43
          ||||||||||||||||||||||
Sbjct: 16 tttccacagctttcttgaactt 37




>41242_csi-MIR396b:mirbase
          Length = 134

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tttccacagctttcttgaact 42
          |||||||||||||||||||||
Sbjct: 19 tttccacagctttcttgaact 39




>41189_aqc-MIR396b:mirbase
          Length = 89

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 23 ttccacagctttcttgaactt 43
          |||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactt 21




>41138_tcc-MIR396a:mirbase
          Length = 146

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tttccacagctttcttgaact 42
          |||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaact 40




>40296_bna-MIR396a:mirbase
          Length = 117

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 23 ttccacagctttcttgaactt 43
          |||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaactt 21




>39379_pab-MIR396a:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 14 gccatgcctttccacagctttcttgaact 42
          |||||||  ||||||||||||||||||||
Sbjct: 7  gccatgctcttccacagctttcttgaact 35




>42814_zma-MIR396h:mirbase
          Length = 124

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaact 79




>42813_zma-MIR396g:mirbase
          Length = 114

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 23  ttccacagctttcttgaact 42
           ||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaact 92




>42808_zma-MIR396b:mirbase
          Length = 136

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>42807_zma-MIR396a:mirbase
          Length = 137

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>42583_sbi-MIR396b:mirbase
          Length = 128

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>42582_sbi-MIR396a:mirbase
          Length = 125

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>42472_ssp-MIR396:mirbase
          Length = 95

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>42461_sof-MIR396:mirbase
          Length = 134

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>42027_osa-MIR396b:mirbase
          Length = 116

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>42026_osa-MIR396a:mirbase
          Length = 154

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>41794_bdi-MIR396d:mirbase
          Length = 152

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52




>41793_bdi-MIR396c:mirbase
          Length = 153

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52




>41663_vvi-MIR396d:mirbase
          Length = 120

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>41662_vvi-MIR396c:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>41441_ptc-MIR396g:mirbase
          Length = 168

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 16 catgcctttccacagctttcttgaactt 43
          ||||| ||||||| ||||||||||||||
Sbjct: 4  catgcttttccacggctttcttgaactt 31




>41436_ptc-MIR396b:mirbase
          Length = 132

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>41435_ptc-MIR396a:mirbase
          Length = 123

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>41241_csi-MIR396a:mirbase
          Length = 153

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>41188_aqc-MIR396a:mirbase
          Length = 122

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 1  ttccacagctttcttgaact 20




>41141_tcc-MIR396d:mirbase
          Length = 182

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 16 catgcctttccacagctttcttgaactt 43
          ||||| ||||||| ||||||||||||||
Sbjct: 14 catgcttttccacggctttcttgaactt 41




>41139_tcc-MIR396b:mirbase
          Length = 151

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>41058_ghr-MIR396b:mirbase
          Length = 135

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>41057_ghr-MIR396a:mirbase
          Length = 136

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>40727_mtr-MIR396b:mirbase
          Length = 95

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 6  ttccacagctttcttgaact 25




>40646_lja-MIR396:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35




>40477_gma-MIR396e:mirbase
          Length = 114

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 7  ttccacagctttcttgaact 26




>40473_gma-MIR396a:mirbase
          Length = 140

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40




>40085_ath-MIR396a:mirbase
          Length = 151

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30




>39877_aly-MIR396a:mirbase
          Length = 172

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 ttccacagctttcttgaact 42
          ||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaact 43




>39741_smo-MIR396:mirbase
          Length = 168

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 25  ccacagctttcttgaacttc 44
           ||||||||||||||||||||
Sbjct: 153 ccacagctttcttgaacttc 134