miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>34952_xbo-mir-137:mirbase
          Length = 88

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 57 atattattgcttgagaatacacgt 80
          ||||||||||||||||||||||||
Sbjct: 50 atattattgcttgagaatacacgt 73




>38754_cte-mir-137:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 23 acgggtattcttgggttaataatatac 49
          |||||||||||||||| ||||||||||
Sbjct: 22 acgggtattcttgggtaaataatatac 48



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 60 ttattgcttgagaatacacgt 80




>38869_lgi-mir-137:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 60 ttattgcttgagaatacacgt 80




>34747_tni-mir-137:mirbase
          Length = 70

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 22 cacgggtattcttgggttaataata 46
          |||||||||||||||||| ||||||
Sbjct: 6  cacgggtattcttgggttgataata 30




>34825_spu-mir-137:mirbase
          Length = 72

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 46 ttattgcttgagaatacacgt 66




>34881_sko-mir-137:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 60 ttattgcttgagaatacacgt 80




>34973_isc-mir-137:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 60 ttattgcttgagaatacacgt 80




>35013_dpu-mir-137:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 60 ttattgcttgagaatacacgt 80




>35064_api-mir-137:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 51 ttattgcttgagaatacacgt 71




>35194_aae-mir-137-1:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 62 ttattgcttgagaatacacgt 82




>35195_aae-mir-137-2:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 64 ttattgcttgagaatacacgt 84




>35292_aga-mir-137:mirbase
          Length = 91

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 54 ttattgcttgagaatacacgt 74




>35370_ame-mir-137:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 60 ttattgcttgagaatacacgt 80




>35540_bmo-mir-137:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 55 ttattgcttgagaatacacgt 75




>36024_cqu-mir-137:mirbase
          Length = 91

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 52 ttattgcttgagaatacacgt 72




>36391_dme-mir-137:mirbase
          Length = 91

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 53 ttattgcttgagaatacacgt 73




>36392_dme-mir-137:mirbase
          Length = 91

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 53 ttattgcttgagaatacacgt 73




>36936_dps-mir-137:mirbase
          Length = 111

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 64 ttattgcttgagaatacacgt 84




>37223_dsi-mir-137:mirbase
          Length = 110

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 64 ttattgcttgagaatacacgt 84




>37580_ngi-mir-137:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 49 ttattgcttgagaatacacgt 69




>37612_nlo-mir-137:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 49 ttattgcttgagaatacacgt 69




>37652_nvi-mir-137:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 60 ttattgcttgagaatacacgt 80




>37745_tca-mir-137:mirbase
          Length = 77

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 48 ttattgcttgagaatacacgt 68




>37746_tca-mir-137:mirbase
          Length = 77

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 ttattgcttgagaatacacgt 80
          |||||||||||||||||||||
Sbjct: 48 ttattgcttgagaatacacgt 68