miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>24749_bfl-mir-4872b:mirbase
          Length = 83

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                      
Query: 11 atgcagtgccgggataactaaaactctgagttctgtttacttcagagttttggtaccccg 70
          |||| ||||||||  ||||||||||||||||||| ||  | ||||||||||| |||||||
Sbjct: 8  atgcggtgccggggcaactaaaactctgagttctcttagcctcagagttttgttaccccg 67

              
Query: 71 gctc 74
          ||||
Sbjct: 68 gctc 71




>24751_bfl-mir-4872c-2:mirbase
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                    
Query: 34 ctctgagttctgtttacttcagagttttggtaccccggctcc 75
          |||||||||||||| || ||||||||||| | ||||| ||||
Sbjct: 34 ctctgagttctgttaacatcagagttttgttgccccgactcc 75