miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>24748_bfl-mir-4872a:mirbase
          Length = 88

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                      
Query: 8  atgcggtgccggggcaactaaaactctgagttctcttagcctcagagttttgttaccccg 67
          |||| ||||||||  ||||||||||||||||||| ||  | ||||||||||| |||||||
Sbjct: 11 atgcagtgccgggataactaaaactctgagttctgtttacttcagagttttggtaccccg 70

              
Query: 68 gctc 71
          ||||
Sbjct: 71 gctc 74




>24751_bfl-mir-4872c-2:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                               
Query: 31 ctctgagttctcttagcctcagagttttgttaccccg 67
          ||||||||||| ||| | ||||||||||||| |||||
Sbjct: 34 ctctgagttctgttaacatcagagttttgttgccccg 70