miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>25315_csa-let-7c-1:mirbase
          Length = 101

 Score = 65.9 bits (33), Expect = 6e-12
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                
Query: 65  gcacaggagatactgtgtaaccttctgcctttgtggc 101
           ||||||||| |||||||||||||||||||||||||||
Sbjct: 60  gcacaggagctactgtgtaaccttctgcctttgtggc 96



 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 11 ccacaatgaggtagtaggttatgcagtt 38
          ||||||||||||||||||||||||||||
Sbjct: 10 ccacaatgaggtagtaggttatgcagtt 37




>24799_cin-let-7a-2:mirbase
          Length = 110

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 16 atgaggtagtaggttatgcagtt 38
          |||||||||||||||||||||||
Sbjct: 16 atgaggtagtaggttatgcagtt 38




>25316_csa-let-7c-2:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 16 atgaggtagtaggttatgcagtt 38
          |||||||||||||||||||||||
Sbjct: 15 atgaggtagtaggttatgcagtt 37