miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>24803_cin-let-7e:mirbase
Length = 98
Score = 147 bits (74), Expect = 2e-36
Identities = 93/98 (94%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 1 tcagctattcgtggctgaggtagttggttgtattgtttcccttgtgtaatgttaactata 60
||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||
Sbjct: 1 tcagctattcgtggctgaggtagttggttgtatcggttcccttgtgaaatgttaactata 60
Query: 61 cagcccgctagcttaacca-tggttgctaactatccac 97
|||||||||| |||||||| ||||||||||||||||||
Sbjct: 61 cagcccgctaacttaaccattggttgctaactatccac 98
>25317_csa-let-7d:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tgaggtagttggttgtattgttt 38
|||||||||||||||||||||||
Sbjct: 16 tgaggtagttggttgtattgttt 38
>34175_dre-let-7d-2:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 ggctgaggtagttggttgtattgttt 38
||||||||||||||||||||| ||||
Sbjct: 8 ggctgaggtagttggttgtatggttt 33
>34529_fru-let-7d:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tgaggtagttggttgtattgtttc 39
|||||||||||||||||| |||||
Sbjct: 15 tgaggtagttggttgtatggtttc 38
>34677_tni-let-7d:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tgaggtagttggttgtattgtttc 39
|||||||||||||||||| |||||
Sbjct: 15 tgaggtagttggttgtatggtttc 38
