miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>24802_cin-let-7d:mirbase
          Length = 101

 Score =  147 bits (74), Expect = 2e-36
 Identities = 93/98 (94%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  tcagctattcgtggctgaggtagttggttgtatcggttcccttgtgaaatgttaactata 60
          ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||
Sbjct: 1  tcagctattcgtggctgaggtagttggttgtattgtttcccttgtgtaatgttaactata 60

                                                
Query: 61 cagcccgctaacttaaccattggttgctaactatccac 98
          |||||||||| |||||||| ||||||||||||||||||
Sbjct: 61 cagcccgctagcttaacca-tggttgctaactatccac 97




>34175_dre-let-7d-2:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 ggctgaggtagttggttgtat 33
          |||||||||||||||||||||
Sbjct: 8  ggctgaggtagttggttgtat 28