miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>24856_cin-mir-375:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 acgttggtcgcacgatcaaagcgtcattattgttctggcgtcattaattgcgtcataaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgttggtcgcacgatcaaagcgtcattattgttctggcgtcattaattgcgtcataaaa 60
Query: 61 tgccttgttcgttcggctcgcgt 83
|||||||||||||||||||||||
Sbjct: 61 tgccttgttcgttcggctcgcgt 83
>38887_lgi-mir-375:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 62 ttgttcgttcggctcgcgt 80
>24704_bfl-mir-375:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 62 ttgttcgttcggctcgcgt 80
>25543_pma-mir-375a:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 60 ttgttcgttcggctcgcgt 78
>25544_pma-mir-375b:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 60 ttgttcgttcggctcgcgt 78
>25853_xtr-mir-375:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 42 ttgttcgttcggctcgcgt 60
>26024_gga-mir-375:mirbase
Length = 65
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 42 ttgttcgttcggctcgcgt 60
>26528_tgu-mir-375:mirbase
Length = 72
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 42 ttgttcgttcggctcgcgt 60
>26822_cfa-mir-375:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 42 ttgttcgttcggctcgcgt 60
>27447_mdo-mir-375:mirbase
Length = 63
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 40 ttgttcgttcggctcgcgt 58
>27878_mml-mir-375:mirbase
Length = 64
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 41 ttgttcgttcggctcgcgt 59
>28616_hsa-mir-375:mirbase
Length = 64
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 41 ttgttcgttcggctcgcgt 59
>30352_ptr-mir-375:mirbase
Length = 63
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 41 ttgttcgttcggctcgcgt 59
>30979_ppy-mir-375:mirbase
Length = 64
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 41 ttgttcgttcggctcgcgt 59
>32044_mmu-mir-375:mirbase
Length = 64
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 41 ttgttcgttcggctcgcgt 59
>32888_rno-mir-375:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 46 ttgttcgttcggctcgcgt 64
>33347_bta-mir-375:mirbase
Length = 64
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 41 ttgttcgttcggctcgcgt 59
>34398_dre-mir-375-1:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 50 ttgttcgttcggctcgcgt 68
>34399_dre-mir-375-2:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 53 ttgttcgttcggctcgcgt 71
>34651_fru-mir-375:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 50 ttgttcgttcggctcgcgt 68
>34799_tni-mir-375:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 50 ttgttcgttcggctcgcgt 68
>34837_spu-mir-375:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 ttgttcgttcggctcgcgt 83
|||||||||||||||||||
Sbjct: 62 ttgttcgttcggctcgcgt 80
