miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>25339_csa-mir-1497:mirbase
          Length = 103

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 65 tgttgaagaattgcaggtggtaggtgct 92
          ||||||||||||||||||||||||||||
Sbjct: 64 tgttgaagaattgcaggtggtaggtgct 91

>25397_odi-mir-1497g:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 67 ttgaagaattgcaggtggtaggt 89
          |||||||||||||||||||||||
Sbjct: 66 ttgaagaattgcaggtggtaggt 88

>25395_odi-mir-1497f-1:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 67 ttgaagaattgcaggtggtagg 88
          ||||||||||||||||||||||
Sbjct: 66 ttgaagaattgcaggtggtagg 87

>25396_odi-mir-1497f-2:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 67 ttgaagaattgcaggtggtagg 88
          ||||||||||||||||||||||
Sbjct: 66 ttgaagaattgcaggtggtagg 87