miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>24874_cin-mir-4000a-1:mirbase
          Length = 55

 Score =  109 bits (55), Expect = 2e-25
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                 
Query: 1  cgaaacttgcgtggaacaggctgttagaatccagccttttcatgtaaatttccat 55
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cgaaacttgcgtggaacaggctgttagaatccagccttttcatgtaaatttccat 55

>24876_cin-mir-4000a-2:mirbase
          Length = 55

 Score =  109 bits (55), Expect = 2e-25
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                 
Query: 1  cgaaacttgcgtggaacaggctgttagaatccagccttttcatgtaaatttccat 55
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cgaaacttgcgtggaacaggctgttagaatccagccttttcatgtaaatttccat 55

>24877_cin-mir-4000a-2:mirbase
          Length = 55

 Score =  109 bits (55), Expect = 2e-25
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                 
Query: 1  cgaaacttgcgtggaacaggctgttagaatccagccttttcatgtaaatttccat 55
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cgaaacttgcgtggaacaggctgttagaatccagccttttcatgtaaatttccat 55

>24878_cin-mir-4000a-3:mirbase
          Length = 55

 Score = 93.7 bits (47), Expect = 1e-20
 Identities = 53/55 (96%)
 Strand = Plus / Plus

                                                                 
Query: 1  cgaaacttgcgtggaacaggctgttagaatccagccttttcatgtaaatttccat 55
          ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 1  cgaaacttgcgtggaacaggctgtttgaatccagccttttcgtgtaaatttccat 55

>24879_cin-mir-4000a-3:mirbase
          Length = 55

 Score = 93.7 bits (47), Expect = 1e-20
 Identities = 53/55 (96%)
 Strand = Plus / Plus

                                                                 
Query: 1  cgaaacttgcgtggaacaggctgttagaatccagccttttcatgtaaatttccat 55
          ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 1  cgaaacttgcgtggaacaggctgtttgaatccagccttttcgtgtaaatttccat 55