miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>24880_cin-mir-4000b-1:mirbase
          Length = 54

 Score =  107 bits (54), Expect = 7e-25
 Identities = 54/54 (100%)
 Strand = Plus / Plus

                                                                
Query: 1  tgaaacttgcaggaacgggccttgttctagcaagtcctttccaacaggtttcgc 54
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgaaacttgcaggaacgggccttgttctagcaagtcctttccaacaggtttcgc 54





>24886_cin-mir-4000d:mirbase
          Length = 52

 Score = 87.7 bits (44), Expect = 7e-19
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                              
Query: 1  tgaaacttgcaggaacgggccttgttctagcaagtcctttccaacaggtttc 52
          ||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1  tgaaacttgcaagaacgggccttgttctaacaagtcctttccaacaggtttc 52





>24887_cin-mir-4000d:mirbase
          Length = 52

 Score = 87.7 bits (44), Expect = 7e-19
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                              
Query: 1  tgaaacttgcaggaacgggccttgttctagcaagtcctttccaacaggtttc 52
          ||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1  tgaaacttgcaagaacgggccttgttctaacaagtcctttccaacaggtttc 52





>24882_cin-mir-4000b-2:mirbase
          Length = 52

 Score = 63.9 bits (32), Expect = 9e-12
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                              
Query: 1  tgaaacttgcaggaacgggccttgttctagcaagtcctttccaacaggtttc 52
          ||||||||||||||||||||||||| | | |||||| ||| |||||||||||
Sbjct: 1  tgaaacttgcaggaacgggccttgtcccaacaagtctttttcaacaggtttc 52





>24883_cin-mir-4000b-2:mirbase
          Length = 52

 Score = 63.9 bits (32), Expect = 9e-12
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                              
Query: 1  tgaaacttgcaggaacgggccttgttctagcaagtcctttccaacaggtttc 52
          ||||||||||||||||||||||||| | | |||||| ||| |||||||||||
Sbjct: 1  tgaaacttgcaggaacgggccttgtcccaacaagtctttttcaacaggtttc 52