miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>24919_cin-mir-4002:mirbase
          Length = 53

 Score =  105 bits (53), Expect = 3e-24
 Identities = 53/53 (100%)
 Strand = Plus / Plus

                                                               
Query: 1  tttgaacttgtacgaattggctgaacagcacagcctgttcgtataagttccaa 53
          |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tttgaacttgtacgaattggctgaacagcacagcctgttcgtataagttccaa 53





>24900_cin-mir-4001a-2:mirbase
          Length = 51

 Score =  101 bits (51), Expect = 4e-23
 Identities = 51/51 (100%)
 Strand = Plus / Minus

                                                             
Query: 2  ttgaacttgtacgaattggctgaacagcacagcctgttcgtataagttcca 52
          |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 ttgaacttgtacgaattggctgaacagcacagcctgttcgtataagttcca 1





>24901_cin-mir-4001a-2:mirbase
          Length = 51

 Score =  101 bits (51), Expect = 4e-23
 Identities = 51/51 (100%)
 Strand = Plus / Minus

                                                             
Query: 2  ttgaacttgtacgaattggctgaacagcacagcctgttcgtataagttcca 52
          |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 ttgaacttgtacgaattggctgaacagcacagcctgttcgtataagttcca 1





>24898_cin-mir-4001a-1:mirbase
          Length = 52

 Score = 44.1 bits (22), Expect = 9e-06
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 31 cagcctgttcgtataagttcca 52
          ||||||||||||||||||||||
Sbjct: 22 cagcctgttcgtataagttcca 1





>24899_cin-mir-4001a-1:mirbase
          Length = 52

 Score = 44.1 bits (22), Expect = 9e-06
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 31 cagcctgttcgtataagttcca 52
          ||||||||||||||||||||||
Sbjct: 22 cagcctgttcgtataagttcca 1