miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>24924_cin-mir-4003a-2:mirbase
Length = 60
Score = 119 bits (60), Expect = 2e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcgatatttaagtataatagcaagaattttaaccaacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagttggttatacattcttgcgatatttaagtataatagcaagaattttaaccaacaca 60
>24925_cin-mir-4003a-3:mirbase
Length = 60
Score = 103 bits (52), Expect = 1e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcgatatttaagtataatagcaagaattttaaccaacaca 60
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagttggttatacattcttgcagtatttaagtataatagcaagaattttaaccaacaca 60
>24926_cin-mir-4003a-3:mirbase
Length = 60
Score = 103 bits (52), Expect = 1e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcgatatttaagtataatagcaagaattttaaccaacaca 60
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagttggttatacattcttgcagtatttaagtataatagcaagaattttaaccaacaca 60
>24921_cin-mir-4003a-1:mirbase
Length = 58
Score = 73.8 bits (37), Expect = 1e-14
Identities = 55/60 (91%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcgatatttaagtataatagcaagaattttaaccaacaca 60
||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||||||||
Sbjct: 1 tgagttggttatacattcttgcggtattaaag--taacagcaagaattttaaccaacaca 58
>24922_cin-mir-4003a-1:mirbase
Length = 58
Score = 73.8 bits (37), Expect = 1e-14
Identities = 55/60 (91%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcgatatttaagtataatagcaagaattttaaccaacaca 60
||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||||||||
Sbjct: 1 tgagttggttatacattcttgcggtattaaag--taacagcaagaattttaaccaacaca 58
>24927_cin-mir-4003a-4:mirbase
Length = 58
Score = 65.9 bits (33), Expect = 3e-12
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcgatatttaagtataatagcaagaattttaaccaacaca 60
||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||| ||||
Sbjct: 1 tgagttggttatacattcttgcggtattcaag--taacagcaagaattttaaccagcaca 58
>24928_cin-mir-4003b:mirbase
Length = 59
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcgatatttaa 31
|||||||||||| || |||||||||||||||
Sbjct: 1 tgagttggttattcaatcttgcgatatttaa 31
>24929_cin-mir-4003b:mirbase
Length = 59
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcgatatttaa 31
|||||||||||| || |||||||||||||||
Sbjct: 1 tgagttggttattcaatcttgcgatatttaa 31
