miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>24921_cin-mir-4003a-1:mirbase
Length = 58
Score = 99.6 bits (50), Expect = 2e-22
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcggtattcaagtaacagcaagaattttaaccagcaca 58
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 1 tgagttggttatacattcttgcggtattaaagtaacagcaagaattttaaccaacaca 58
>24922_cin-mir-4003a-1:mirbase
Length = 58
Score = 99.6 bits (50), Expect = 2e-22
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcggtattcaagtaacagcaagaattttaaccagcaca 58
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 1 tgagttggttatacattcttgcggtattaaagtaacagcaagaattttaaccaacaca 58
>24923_cin-mir-4003a-2:mirbase
Length = 60
Score = 65.9 bits (33), Expect = 3e-12
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcggtattcaag--taacagcaagaattttaaccagcaca 58
||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||| ||||
Sbjct: 1 tgagttggttatacattcttgcgatatttaagtataatagcaagaattttaaccaacaca 60
>24924_cin-mir-4003a-2:mirbase
Length = 60
Score = 65.9 bits (33), Expect = 3e-12
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcggtattcaag--taacagcaagaattttaaccagcaca 58
||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||| ||||
Sbjct: 1 tgagttggttatacattcttgcgatatttaagtataatagcaagaattttaaccaacaca 60
>24925_cin-mir-4003a-3:mirbase
Length = 60
Score = 65.9 bits (33), Expect = 3e-12
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcggtattcaag--taacagcaagaattttaaccagcaca 58
|||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||| ||||
Sbjct: 1 tgagttggttatacattcttgcagtatttaagtataatagcaagaattttaaccaacaca 60
>24926_cin-mir-4003a-3:mirbase
Length = 60
Score = 65.9 bits (33), Expect = 3e-12
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 1 tgagttggttatacattcttgcggtattcaag--taacagcaagaattttaaccagcaca 58
|||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||| ||||
Sbjct: 1 tgagttggttatacattcttgcagtatttaagtataatagcaagaattttaaccaacaca 60