miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>24937_cin-mir-4005b:mirbase
          Length = 54

 Score =  107 bits (54), Expect = 7e-25
 Identities = 54/54 (100%)
 Strand = Plus / Plus

                                                                
Query: 1  tgagttggtgctatcatgcttgtgtattacgtcacaaggggaagtaccagctct 54
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgagttggtgctatcatgcttgtgtattacgtcacaaggggaagtaccagctct 54





>24934_cin-mir-4005a:mirbase
          Length = 55

 Score = 87.7 bits (44), Expect = 7e-19
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                              
Query: 1  tgagttggtgctatcatgcttgtgtattacgtcacaaggggaagtaccagct 52
          ||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 1  tgagttggtgctatcatacttgtgtattacgtcacaagggaaagtaccagct 52





>24935_cin-mir-4005a:mirbase
          Length = 55

 Score = 87.7 bits (44), Expect = 7e-19
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                              
Query: 1  tgagttggtgctatcatgcttgtgtattacgtcacaaggggaagtaccagct 52
          ||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 1  tgagttggtgctatcatacttgtgtattacgtcacaagggaaagtaccagct 52





>24938_cin-mir-4005c:mirbase
          Length = 55

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 28 tacgtcacaaggggaagtaccagct 52
          |||||||| ||||||||||||||||
Sbjct: 28 tacgtcactaggggaagtaccagct 52