miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>24942_cin-mir-4006a-2:mirbase
          Length = 53

 Score =  105 bits (53), Expect = 3e-24
 Identities = 53/53 (100%)
 Strand = Plus / Plus

                                                               
Query: 1  tggaacatgtaagtaagggctgcccatgtgcagtcgttaccaacatgttttac 53
          |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tggaacatgtaagtaagggctgcccatgtgcagtcgttaccaacatgttttac 53




>24939_cin-mir-4006a-1:mirbase
          Length = 49

 Score = 44.1 bits (22), Expect = 9e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tggaacatgtaagtaagggctg 22
          ||||||||||||||||||||||
Sbjct: 1  tggaacatgtaagtaagggctg 22




>24940_cin-mir-4006a-1:mirbase
          Length = 49

 Score = 44.1 bits (22), Expect = 9e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tggaacatgtaagtaagggctg 22
          ||||||||||||||||||||||
Sbjct: 1  tggaacatgtaagtaagggctg 22




>24943_cin-mir-4006a-3:mirbase
          Length = 51

 Score = 44.1 bits (22), Expect = 9e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tggaacatgtaagtaagggctg 22
          ||||||||||||||||||||||
Sbjct: 1  tggaacatgtaagtaagggctg 22




>24944_cin-mir-4006a-3:mirbase
          Length = 51

 Score = 44.1 bits (22), Expect = 9e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tggaacatgtaagtaagggctg 22
          ||||||||||||||||||||||
Sbjct: 1  tggaacatgtaagtaagggctg 22




>24945_cin-mir-4006b:mirbase
          Length = 50

 Score = 38.2 bits (19), Expect = 5e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tggaacatgtaagtaagggctgc 23
          ||||||||||| |||||||||||
Sbjct: 1  tggaacatgtacgtaagggctgc 23




>24946_cin-mir-4006b:mirbase
          Length = 50

 Score = 38.2 bits (19), Expect = 5e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tggaacatgtaagtaagggctgc 23
          ||||||||||| |||||||||||
Sbjct: 1  tggaacatgtacgtaagggctgc 23