miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42079_osa-MIR442:mirbase
          Length = 233

 Score =  139 bits (70), Expect = 8e-34
 Identities = 122/138 (88%), Gaps = 1/138 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   aaaataaattacagaatccgtcagtaaaccgtgagacaaatttattaagcctaattaatc 62
           |||| ||||||||||||||||| |||||| | ||||| ||||||||||||||||||||||
Sbjct: 199 aaaacaaattacagaatccgtctgtaaactgcgagacgaatttattaagcctaattaatc 140

                                                                       
Query: 63  cgtcattagcacatgtgttaatgtagcactttattgttaaatcatgaactaattaggctt 122
           ||||||||||| |||| ||| ||||||||   ||||| | |||||| |  ||||||||||
Sbjct: 139 cgtcattagcaaatgt-ttactgtagcaccacattgtcagatcatggagcaattaggctt 81

                             
Query: 123 aaaagattcgtctcgcaa 140
           ||||||||||||||||||
Sbjct: 80  aaaagattcgtctcgcaa 63



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 112 taattaggcttaaaagattcgtctcgca 139
           ||||||||||||| | ||||||||||||
Sbjct: 143 taattaggcttaataaattcgtctcgca 170




>42370_osa-MIR2124a:mirbase
          Length = 249

 Score =  119 bits (60), Expect = 7e-28
 Identities = 118/136 (86%), Gaps = 1/136 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   aaaataaattacagaatccgtcagtaaaccgtgagacaaatttattaagcctaattaatc 62
           |||| |||||||||| |||| | |||||| | ||||||||||||||||||||||||||||
Sbjct: 204 aaaacaaattacagattccgcctgtaaactgcgagacaaatttattaagcctaattaatc 145

                                                                       
Query: 63  cgtcattagcacatgtgttaatgtagcactttattgttaaatcatgaactaattaggctt 122
           ||||||||||| || | ||| ||||||||   ||||| ||||||||   |||||||||| 
Sbjct: 144 cgtcattagcaaatat-ttactgtagcaccacattgtcaaatcatggtataattaggctc 86

                           
Query: 123 aaaagattcgtctcgc 138
           ||||||||||||||||
Sbjct: 85  aaaagattcgtctcgc 70




>42371_osa-MIR2124b:mirbase
          Length = 239

 Score = 99.6 bits (50), Expect = 7e-22
 Identities = 129/154 (83%), Gaps = 1/154 (0%)
 Strand = Plus / Minus

                                                                       
Query: 16  gaatccgtcagtaaaccgtgagacaaatttattaagcctaattaatccgtcattagcaca 75
           ||||||| | |||||||| || || ||||||||||||||||||||||||  ||||||| |
Sbjct: 194 gaatccgcctgtaaaccgcgacacgaatttattaagcctaattaatccggtattagcaaa 135

                                                                       
Query: 76  tgtgttaatgtagcactttattgttaaatcatgaactaattaggcttaaaagattcgtct 135
           ||| ||| ||||||||  |||||| ||||||||    |||||| ||||||||||| ||||
Sbjct: 134 tgt-ttactgtagcaccatattgtcaaatcatggcgcaattagacttaaaagatttgtct 76

                                             
Query: 136 cgcaaagtagtcacaatctgtgcaattagttatt 169
           |||||  ||  | ||||||||| |||||||||||
Sbjct: 75  cgcaatttacacgcaatctgtgtaattagttatt 42




>42376_osa-MIR2124g:mirbase
          Length = 251

 Score = 93.7 bits (47), Expect = 4e-20
 Identities = 138/167 (82%), Gaps = 1/167 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   aaaataaattacagaatccgtcagtaaaccgtgagacaaatttattaagcctaattaatc 62
           |||| |||||| |||||||| | |||||||| ||||| ||||||||||| ||||||||| 
Sbjct: 206 aaaacaaattagagaatccgcctgtaaaccgcgagacgaatttattaagactaattaatt 147

                                                                       
Query: 63  cgtcattagcacatgtgttaatgtagcactttattgttaaatcatgaactaattaggctt 122
           ||| ||||||| |||| ||| |||||||    ||||| | |||||| |  ||||| ||||
Sbjct: 146 cgttattagcaaatgt-ttactgtagcatcacattgtcagatcatggagcaattatgctt 88

                                                          
Query: 123 aaaagattcgtctcgcaaagtagtcacaatctgtgcaattagttatt 169
           ||||||||||| ||||||  ||  | ||||||||| |||||||||||
Sbjct: 87  aaaagattcgtgtcgcaatttacacgcaatctgtgtaattagttatt 41




>42374_osa-MIR2124e:mirbase
          Length = 247

 Score = 91.7 bits (46), Expect = 2e-19
 Identities = 92/106 (86%), Gaps = 1/106 (0%)
 Strand = Plus / Minus

                                                                       
Query: 35  gagacaaatttattaagcctaattaatccgtcattagcacatgtgttaatgtagcacttt 94
           ||||| ||||||||| | |||||||||| |||||||||| |||| ||| ||||||||   
Sbjct: 170 gagacgaatttattatgtctaattaatctgtcattagcaaatgt-ttattgtagcaccac 112

                                                         
Query: 95  attgttaaatcatgaactaattaggcttaaaagattcgtctcgcaa 140
           ||||| |||||||| |  ||||||||||||||||||||||||||||
Sbjct: 111 attgtcaaatcatggagcaattaggcttaaaagattcgtctcgcaa 66




>42373_osa-MIR2124d:mirbase
          Length = 250

 Score = 91.7 bits (46), Expect = 2e-19
 Identities = 116/138 (84%), Gaps = 1/138 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   aaaataaattacagaatccgtcagtaaaccgtgagacaaatttattaagcctaattaatc 62
           ||||||||||||||| |||| ||| |||| | ||| | ||||||||||||||||||||| 
Sbjct: 205 aaaataaattacagattccgccagaaaactgcgagtcgaatttattaagcctaattaatt 146

                                                                       
Query: 63  cgtcattagcacatgtgttaatgtagcactttattgttaaatcatgaactaattaggctt 122
           ||||||||||| || | ||| ||||||||   ||||| |||||||     ||||||||||
Sbjct: 145 cgtcattagcaaatat-ttactgtagcaccacattgtcaaatcatagcgcaattaggctt 87

                             
Query: 123 aaaagattcgtctcgcaa 140
           ||||||||| ||||||||
Sbjct: 86  aaaagattcctctcgcaa 69




>42377_osa-MIR2124h:mirbase
          Length = 275

 Score = 75.8 bits (38), Expect = 9e-15
 Identities = 60/66 (90%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                       
Query: 26  gtaaaccgtgagacaaatttattaagcctaattaatccgtcattagcacatgtgttaatg 85
           |||||||| ||||||||||||||||||||||||||||| || |||||| |||| ||| ||
Sbjct: 204 gtaaaccgcgagacaaatttattaagcctaattaatccctcgttagcatatgt-ttactg 146

                 
Query: 86  tagcac 91
           ||||||
Sbjct: 145 tagcac 140




>42372_osa-MIR2124c:mirbase
          Length = 248

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 3   aaaataaattacagaatccgtcagtaaaccgtgagacaaatttattaagcctaattaatc 62
           ||||||||||||||| |||| ||| ||||   ||||| ||||||||||||||||||||||
Sbjct: 203 aaaataaattacagattccgccagaaaactacgagacgaatttattaagcctaattaatc 144

                      
Query: 63  cgtcattagca 73
             |||||||||
Sbjct: 143 tatcattagca 133




>42378_osa-MIR2124i:mirbase
          Length = 250

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 78/93 (83%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 41  aatttattaagcctaattaatccgtcattagcacatgtgttaatgtagcactttattgtt 100
           |||||||||||||| |||||||| | |||| || |||| ||| ||||||||   ||||| 
Sbjct: 167 aatttattaagcctgattaatccattattaacaaatgt-ttactgtagcaccacattgtc 109

                                            
Query: 101 aaatcatgaactaattaggcttaaaagattcgt 133
           | |||||| |  |||||||||||||||||||||
Sbjct: 108 agatcatggagcaattaggcttaaaagattcgt 76




>42095_osa-MIR445d:mirbase
          Length = 312

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 32  cgtgagacaaatttattaagcctaattaatccgtcattagcacatgt 78
           ||||||||||| || ||||||||||||||||| | |||| |||||||
Sbjct: 208 cgtgagacaaaatttttaagcctaattaatccataattaacacatgt 162




>42094_osa-MIR445c:mirbase
          Length = 260

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 112 taattaggcttaaaagattcgtctcg 137
           ||||||||||||||||||||||||||
Sbjct: 148 taattaggcttaaaagattcgtctcg 173



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 112 taattaggcttaaaagattcgtctcgca 139
           ||||||||||||||| ||||||||||||
Sbjct: 113 taattaggcttaaaaaattcgtctcgca 86



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 35  gagacaaatttattaagcctaattaatcc 63
           ||||| ||||| |||||||||||||||||
Sbjct: 89  gagacgaattttttaagcctaattaatcc 117




>42099_osa-MIR445h:mirbase
          Length = 277

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 112 taattaggcttaaaagattcgtctcgca 139
           ||||||||||||||| ||||||||||||
Sbjct: 121 taattaggcttaaaaaattcgtctcgca 94



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 35  gagacaaatttattaagcctaattaatcc 63
           ||||| ||||| |||||||||||||||||
Sbjct: 97  gagacgaattttttaagcctaattaatcc 125



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 112 taattaggcttaaaagattcgtctcgcaaagtagtc 147
           ||||||| || |||||||||||||||| || |||||
Sbjct: 156 taattagactcaaaagattcgtctcgcgaattagtc 191




>42098_osa-MIR445g:mirbase
          Length = 275

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 112 taattaggcttaaaagattcgtctcgca 139
           ||||||||||||||| ||||||||||||
Sbjct: 120 taattaggcttaaaaaattcgtctcgca 93



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 35  gagacaaatttattaagcctaattaatcc 63
           ||||| ||||| |||||||||||||||||
Sbjct: 96  gagacgaattttttaagcctaattaatcc 124




>42096_osa-MIR445e:mirbase
          Length = 265

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 112 taattaggcttaaaagattcgtctcgca 139
           ||||||||||||||| ||||||||||||
Sbjct: 115 taattaggcttaaaaaattcgtctcgca 88



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 35  gagacaaatttattaagcctaattaatcc 63
           ||||| ||||| |||||||||||||||||
Sbjct: 91  gagacgaattttttaagcctaattaatcc 119



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 112 taattaggcttaaaagattcgtctcgcaaagtagtc 147
           ||||||| || |||||||||||||||| || |||||
Sbjct: 150 taattagactcaaaagattcgtctcgcgaattagtc 185




>42092_osa-MIR445a:mirbase
          Length = 268

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 112 taattaggcttaaaagattcgtctcgca 139
           ||||||||||||||| ||||||||||||
Sbjct: 108 taattaggcttaaaaaattcgtctcgca 81



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 35  gagacaaatttattaagcctaattaatcc 63
           ||||| ||||| |||||||||||||||||
Sbjct: 84  gagacgaattttttaagcctaattaatcc 112



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 95  attgttaaatcatgaactaattaggcttaaaagattcgtctcgcaaagtagtc 147
           ||||| ||||||||   ||||||| || |||||||||||||||| || |||||
Sbjct: 143 attgtcaaatcatggtgtaattagactcaaaagattcgtctcgcgaattagtc 195




>42097_osa-MIR445f:mirbase
          Length = 305

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 112 taattaggcttaaaagattcgtctcgca 139
           ||||||||||||||| ||||||| ||||
Sbjct: 136 taattaggcttaaaaaattcgtcccgca 109



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 112 taattaggcttaaaagattcgtctcgcaaagtagtc 147
           ||||||| || |||||||||||||||| || |||||
Sbjct: 171 taattagactcaaaagattcgtctcgcgaattagtc 206




>42093_osa-MIR445b:mirbase
          Length = 264

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 112 taattaggcttaaaagattcgtctcgca 139
           |||||||||||||||  |||||||||||
Sbjct: 114 taattaggcttaaaaagttcgtctcgca 87



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 112 taattaggcttaaaagattcgtctcgcaaagtagtc 147
           ||||||| || |||||||||||||||| || |||||
Sbjct: 149 taattagactcaaaagattcgtctcgcgaattagtc 184