miRNEST 2.0, an integrative microRNA resource :: BLAST
>42454_sof-MIR159c:mirbase
Length = 238
Score = 392 bits (198), Expect = e-110
Identities = 198/198 (100%)
Strand = Plus / Plus
Query: 1 gaagaagatggcgaagaaaagtgatcgaagagctcccttcgatccaatccaggaggggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gaagaagatggcgaagaaaagtgatcgaagagctcccttcgatccaatccaggaggggaa 76
Query: 61 gtggtcggttgcagctgccggttcatggatgcctctctggtgcagcaatgactaatgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gtggtcggttgcagctgccggttcatggatgcctctctggtgcagcaatgactaatgctc 136
Query: 121 acctgcacttgcatgggtgtgcatgacccgggagatgaacccaccatcatctttccctcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 acctgcacttgcatgggtgtgcatgacccgggagatgaacccaccatcatctttccctcg 196
Query: 181 tgcttggattgaagggag 198
||||||||||||||||||
Sbjct: 197 tgcttggattgaagggag 214
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 347 bits (175), Expect = 2e-96
Identities = 190/195 (97%)
Strand = Plus / Plus
Query: 4 gaagatggcgaagaaaagtgatcgaagagctcccttcgatccaatccaggaggggaagtg 63
||||| |||||||||||| || | ||||||||||||||||||||||||||||||||||||
Sbjct: 35 gaagaaggcgaagaaaagcgaacaaagagctcccttcgatccaatccaggaggggaagtg 94
Query: 64 gtcggttgcagctgccggttcatggatgcctctctggtgcagcaatgactaatgctcacc 123
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 95 gtcggttgcagctgccggttcatggatgcctctctggtgcagcaatgactgatgctcacc 154
Query: 124 tgcacttgcatgggtgtgcatgacccgggagatgaacccaccatcatctttccctcgtgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tgcacttgcatgggtgtgcatgacccgggagatgaacccaccatcatctttccctcgtgc 214
Query: 184 ttggattgaagggag 198
|||||||||||||||
Sbjct: 215 ttggattgaagggag 229
>42692_zma-MIR159c:mirbase
Length = 217
Score = 278 bits (140), Expect = 2e-75
Identities = 176/187 (94%), Gaps = 2/187 (1%)
Strand = Plus / Plus
Query: 14 aagaaaagtgatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgca 73
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 aagaaaggcgatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgca 66
Query: 74 gctgccggttcatggatgcctctctggtgcagcaatgactaatgctcac--ctgcacttg 131
||||||||||||||||| ||||||||||||||||||| | ||||||| |||||||||
Sbjct: 67 gctgccggttcatggatacctctctggtgcagcaatggccgctgctcacctctgcacttg 126
Query: 132 catgggtgtgcatgacccgggagatgaacccaccatcatctttccctcgtgcttggattg 191
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 127 catgggtgtgcatgacccgggagatgagcccgccatcatctttccctcgtgcttggattg 186
Query: 192 aagggag 198
|||||||
Sbjct: 187 aagggag 193
>42693_zma-MIR159d:mirbase
Length = 217
Score = 268 bits (135), Expect = 2e-72
Identities = 168/178 (94%), Gaps = 2/178 (1%)
Strand = Plus / Plus
Query: 23 gatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggt 82
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 16 gatcgaagagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggt 75
Query: 83 tcatggatgcctctctggtgcagcaatgac--taatgctcacctgcacttgcatgggtgt 140
|||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 76 tcatggatacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgt 135
Query: 141 gcatgacccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 198
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 136 gcatgacccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggag 193
>41730_bdi-MIR159:mirbase
Length = 234
Score = 155 bits (78), Expect = 2e-38
Identities = 153/174 (87%), Gaps = 3/174 (1%)
Strand = Plus / Plus
Query: 27 gaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcat 86
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 27 gaagagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcat 86
Query: 87 ggatgcctctctggtgca-gcaatg-actaatgctcacctgcacttgcatgggtgtgcat 144
|||| ||| ||||||||| ||| || |||| | | |||| ||||| ||| |||||
Sbjct: 87 ggatacctgtctggtgcatgcagtgtggtaatagcctgc-gcacctgcatcggtttgcat 145
Query: 145 gacccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 198
||||||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 146 gacccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggag 199
>41922_osa-MIR159f:mirbase
Length = 188
Score = 125 bits (63), Expect = 2e-29
Identities = 143/169 (84%), Gaps = 8/169 (4%)
Strand = Plus / Plus
Query: 30 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 89
|||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
Query: 90 tgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgcatgaccc 149
| ||||| |||| ||| | | ||| ||||||||||||||| ||||||||||
Sbjct: 73 tacctctgcagtgc----atgtcgtaggct----tgcacttgcatgggtttgcatgaccc 124
Query: 150 gggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 198
|||||||||||||||||| |||| | || ||||||||||||||||||
Sbjct: 125 gggagatgaacccaccattgtcttcctcttatgcttggattgaagggag 173
>41919_osa-MIR159c:mirbase
Length = 197
Score = 91.7 bits (46), Expect = 2e-19
Identities = 140/170 (82%), Gaps = 1/170 (0%)
Strand = Plus / Plus
Query: 30 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 89
||||||| ||||||||||| |||||| ||||||||| || ||||||||||| ||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtaggatgcagctgccgattcatgga 72
Query: 90 tgcctctctggtgca-gcaatgactaatgctcacctgcacttgcatgggtgtgcatgacc 148
| ||||| ||||| | | | | || ||||||||||||||||| |||||||||
Sbjct: 73 tacctctggagtgcatggcagcaatgctgtaggcctgcacttgcatgggtttgcatgacc 132
Query: 149 cgggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 198
||||||||||||||||||| |||| | || || |||||||||||||||
Sbjct: 133 cgggagatgaacccaccattgtcttcctctattgattggattgaagggag 182
>41921_osa-MIR159e:mirbase
Length = 191
Score = 85.7 bits (43), Expect = 1e-17
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 27 gaagagctccctt-cgatccaatccaggaggggaagtggtcggttgcagctgccggttca 85
||||||||||||| ||||||||| |||||| ||||||||| || ||||||||||||||||
Sbjct: 10 gaagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttca 69
Query: 86 tggatgcctct 96
||||| |||||
Sbjct: 70 tggatacctct 80
>41920_osa-MIR159d:mirbase
Length = 189
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 30 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 89
||||||| ||||||||||| |||||| ||||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
Query: 90 tgcctct 96
| |||||
Sbjct: 73 tacctct 79
Score = 63.9 bits (32), Expect = 5e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 122 cctgcacttgcatgggtgtgcatgacccgggagatgaacc 161
||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 98 cctgcacttgcatgggtttgcatgacctgggagatgaacc 137
