miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>25116_cin-mir-4077c:mirbase
          Length = 55

 Score = 87.7 bits (44), Expect = 7e-19
 Identities = 54/56 (96%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                  
Query: 1  aagttggaaattgattgactgggtttcgaaatataccagttaattgactccaacta 56
          ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1  aagttggaagttgattgactgggttt-gaaatataccagttaattgactccaacta 55




>25115_cin-mir-4077b:mirbase
          Length = 56

 Score = 56.0 bits (28), Expect = 2e-09
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                  
Query: 1  aagttggaaattgattgactgggtttcgaaatataccagttaattgactccaacta 56
          ||||||||| |||||||||||||| | ||||  |||||||||||| ||| ||||||
Sbjct: 1  aagttggaatttgattgactgggtgttgaaacgtaccagttaattaacttcaacta 56