miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42483_ssp-MIR1128:mirbase
          Length = 275

 Score =  545 bits (275), Expect = e-156
 Identities = 275/275 (100%)
 Strand = Plus / Minus

                                                                       
Query: 13  ctacaaacatactacctccgtcccaaaaagaatgtaaccctcgcttcccgaggagtcaaa 72
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ctacaaacatactacctccgtcccaaaaagaatgtaaccctcgcttcccgaggagtcaaa 216

                                                                       
Query: 73  gattcttaactttgactaaatacaaataaaaacatattgatgcttatgatgtgtaataag 132
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gattcttaactttgactaaatacaaataaaaacatattgatgcttatgatgtgtaataag 156

                                                                       
Query: 133 tataattggattagttatgaaatatagtttcataataaacctaattagagattaaaatgt 192
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tataattggattagttatgaaatatagtttcataataaacctaattagagattaaaatgt 96

                                                                       
Query: 193 agataatatcatctataaacttggtcaaatttaaagattctttgactcctcggaaatcga 252
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  agataatatcatctataaacttggtcaaatttaaagattctttgactcctcggaaatcga 36

                                              
Query: 253 gatttacatgttttttgggacggagggagtagtag 287
           |||||||||||||||||||||||||||||||||||
Sbjct: 35  gatttacatgttttttgggacggagggagtagtag 1



 Score = 52.0 bits (26), Expect = 3e-07
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                    
Query: 22 tactacctccgtcccaaaaagaatgtaaccctcgcttcccgaggagtcaaagattctt 79
          |||| |||||||||||||||  ||||||  |||| || ||||||||||||||| ||||
Sbjct: 5  tactccctccgtcccaaaaaacatgtaaatctcgatttccgaggagtcaaagaatctt 62



 Score = 52.0 bits (26), Expect = 3e-07
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 226 aagattctttgactcctcggaaatcgagatttacatgttttttgggacggagggagta 283
           |||| ||||||||||||||| || ||||  ||||||  ||||||||||||||| ||||
Sbjct: 209 aagaatctttgactcctcgggaagcgagggttacattctttttgggacggaggtagta 266




>41838_bdi-MIR5169:mirbase
          Length = 210

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 204 tctataaacttggtcaaatttaaa 227
           ||||||||||||||||||||||||
Sbjct: 160 tctataaacttggtcaaatttaaa 183




>42655_tae-MIR1122:mirbase
          Length = 295

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 tttttgggacggagggagta 283
           ||||||||||||||||||||
Sbjct: 44  tttttgggacggagggagta 25




>42222_osa-MIR1439:mirbase
          Length = 172

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 21 atactacctccgtcccaaaa 40
          ||||||||||||||||||||
Sbjct: 22 atactacctccgtcccaaaa 41