miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42483_ssp-MIR1128:mirbase
          Length = 275

 Score =  545 bits (275), Expect = e-156
 Identities = 275/275 (100%)
 Strand = Plus / Minus

                                                                       
Query: 15  ctacaaacatactacctccgtcccaaaaagaatgtaaccctcgcttcccgaggagtcaaa 74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ctacaaacatactacctccgtcccaaaaagaatgtaaccctcgcttcccgaggagtcaaa 216

                                                                       
Query: 75  gattcttaactttgactaaatacaaataaaaacatattgatgcttatgatgtgtaataag 134
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gattcttaactttgactaaatacaaataaaaacatattgatgcttatgatgtgtaataag 156

                                                                       
Query: 135 tataattggattagttatgaaatatagtttcataataaacctaattagagattaaaatgt 194
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tataattggattagttatgaaatatagtttcataataaacctaattagagattaaaatgt 96

                                                                       
Query: 195 agataatatcatctataaacttggtcaaatttaaagattctttgactcctcggaaatcga 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  agataatatcatctataaacttggtcaaatttaaagattctttgactcctcggaaatcga 36

                                              
Query: 255 gatttacatgttttttgggacggagggagtagtag 289
           |||||||||||||||||||||||||||||||||||
Sbjct: 35  gatttacatgttttttgggacggagggagtagtag 1



 Score = 52.0 bits (26), Expect = 3e-07
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                    
Query: 24 tactacctccgtcccaaaaagaatgtaaccctcgcttcccgaggagtcaaagattctt 81
          |||| |||||||||||||||  ||||||  |||| || ||||||||||||||| ||||
Sbjct: 5  tactccctccgtcccaaaaaacatgtaaatctcgatttccgaggagtcaaagaatctt 62



 Score = 52.0 bits (26), Expect = 3e-07
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 228 aagattctttgactcctcggaaatcgagatttacatgttttttgggacggagggagta 285
           |||| ||||||||||||||| || ||||  ||||||  ||||||||||||||| ||||
Sbjct: 209 aagaatctttgactcctcgggaagcgagggttacattctttttgggacggaggtagta 266




>41838_bdi-MIR5169:mirbase
          Length = 210

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 206 tctataaacttggtcaaatttaaa 229
           ||||||||||||||||||||||||
Sbjct: 160 tctataaacttggtcaaatttaaa 183




>42655_tae-MIR1122:mirbase
          Length = 295

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 266 tttttgggacggagggagta 285
           ||||||||||||||||||||
Sbjct: 44  tttttgggacggagggagta 25




>42222_osa-MIR1439:mirbase
          Length = 172

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 atactacctccgtcccaaaa 42
          ||||||||||||||||||||
Sbjct: 22 atactacctccgtcccaaaa 41