miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>24798_cin-let-7a-1:mirbase
          Length = 110

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                
Query: 60  gcacaggagctactgtgtaaccttctgcctttgtggc 96
           ||||||||| |||||||||||||||||||||||||||
Sbjct: 65  gcacaggagatactgtgtaaccttctgcctttgtggc 101



 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 10 ccacaatgaggtagtaggttatgcagtt 37
          ||||||||||||||||||||||||||||
Sbjct: 11 ccacaatgaggtagtaggttatgcagtt 38




>24799_cin-let-7a-2:mirbase
          Length = 110

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 15 atgaggtagtaggttatgcagtttt 39
          |||||||||||||||||||||||||
Sbjct: 16 atgaggtagtaggttatgcagtttt 40




>25316_csa-let-7c-2:mirbase
          Length = 102

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 15 atgaggtagtaggttatgcagttt 38
          ||||||||||||||||||||||||
Sbjct: 15 atgaggtagtaggttatgcagttt 38