miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>24814_cin-mir-31:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 ctatggcaagatgttggcatagctat 38
||||||||||||||||||||||||||
Sbjct: 13 ctatggcaagatgttggcatagctat 38
>24656_bfl-mir-31:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 atggcaagatgttggcatagct 36
||||||||||||||||||||||
Sbjct: 18 atggcaagatgttggcatagct 39
>34252_dre-mir-31:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 atggcaagatgttggcatagct 36
||||||||||||||||||||||
Sbjct: 7 atggcaagatgttggcatagct 28
>35182_aae-mir-31:mirbase
Length = 149
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tggcaagatgttggcatagct 36
|||||||||||||||||||||
Sbjct: 51 tggcaagatgttggcatagct 71
>36013_cqu-mir-31:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tggcaagatgttggcatagct 36
|||||||||||||||||||||
Sbjct: 12 tggcaagatgttggcatagct 32
>38856_lgi-mir-31:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcaagatgttggcatagct 36
||||||||||||||||||||
Sbjct: 22 ggcaagatgttggcatagct 41
>38737_cte-mir-31:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcaagatgttggcatagct 36
||||||||||||||||||||
Sbjct: 22 ggcaagatgttggcatagct 41
>38622_ppc-mir-72:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcaagatgttggcatagct 36
||||||||||||||||||||
Sbjct: 25 ggcaagatgttggcatagct 44
>38534_crm-mir-72:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcaagatgttggcatagct 36
||||||||||||||||||||
Sbjct: 22 ggcaagatgttggcatagct 41
>25738_xtr-mir-31:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcaagatgttggcatagct 36
||||||||||||||||||||
Sbjct: 18 ggcaagatgttggcatagct 37
>25922_gga-mir-31:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcaagatgttggcatagct 36
||||||||||||||||||||
Sbjct: 26 ggcaagatgttggcatagct 45
>26429_tgu-mir-31:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcaagatgttggcatagct 36
||||||||||||||||||||
Sbjct: 26 ggcaagatgttggcatagct 45
>27357_mdo-mir-31:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcaagatgttggcatagct 36
||||||||||||||||||||
Sbjct: 13 ggcaagatgttggcatagct 32
>31456_oan-mir-31:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcaagatgttggcatagct 36
||||||||||||||||||||
Sbjct: 18 ggcaagatgttggcatagct 37
>34813_spu-mir-31:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcaagatgttggcatagct 36
||||||||||||||||||||
Sbjct: 20 ggcaagatgttggcatagct 39
>34869_sko-mir-31:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcaagatgttggcatagct 36
||||||||||||||||||||
Sbjct: 22 ggcaagatgttggcatagct 41
>38106_bma-mir-72:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcaagatgttggcatagct 36
||||||||||||||||||||
Sbjct: 19 ggcaagatgttggcatagct 38
>38308_cel-mir-72:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcaagatgttggcatagct 36
||||||||||||||||||||
Sbjct: 18 ggcaagatgttggcatagct 37
