miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34371_dre-mir-216b-1:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 taatctctgcaggcaactgtgatgt 40
|||||||||||||||||||||||||
Sbjct: 11 taatctctgcaggcaactgtgatgt 35
>34372_dre-mir-216b-2:mirbase
Length = 76
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 taatctctgcaggcaactgtgatgt 40
|||||||||||||||||||||||||
Sbjct: 10 taatctctgcaggcaactgtgatgt 34
>34638_fru-mir-216b:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 taatctctgcaggcaactgtgatg 39
||||||||||||||||||||||||
Sbjct: 9 taatctctgcaggcaactgtgatg 32
>34786_tni-mir-216b:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 taatctctgcaggcaactgtgatg 39
||||||||||||||||||||||||
Sbjct: 9 taatctctgcaggcaactgtgatg 32
>26776_cfa-mir-216b:mirbase
Length = 62
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 aatctctgcaggcaactgtgatgtca 42
||||||||||||||| ||||||||||
Sbjct: 2 aatctctgcaggcaaatgtgatgtca 27
>27100_eca-mir-216b:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 aatctctgcaggcaactgtgatgtca 42
||||||||||||||| ||||||||||
Sbjct: 15 aatctctgcaggcaaatgtgatgtca 40
>27812_mml-mir-216b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 aatctctgcaggcaactgtgatgtca 42
||||||||||||||| ||||||||||
Sbjct: 12 aatctctgcaggcaaatgtgatgtca 37
>28534_hsa-mir-216b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 aatctctgcaggcaactgtgatgtca 42
||||||||||||||| ||||||||||
Sbjct: 12 aatctctgcaggcaaatgtgatgtca 37
>30292_ptr-mir-216b:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 aatctctgcaggcaactgtgatgtca 42
||||||||||||||| ||||||||||
Sbjct: 12 aatctctgcaggcaaatgtgatgtca 37
>30910_ppy-mir-216b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 aatctctgcaggcaactgtgatgtca 42
||||||||||||||| ||||||||||
Sbjct: 12 aatctctgcaggcaaatgtgatgtca 37
>31944_mmu-mir-216b:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 aatctctgcaggcaactgtgatgtca 42
||||||||||||||| ||||||||||
Sbjct: 15 aatctctgcaggcaaatgtgatgtca 40
>32807_rno-mir-216b:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 aatctctgcaggcaactgtgatgtca 42
||||||||||||||| ||||||||||
Sbjct: 21 aatctctgcaggcaaatgtgatgtca 46
>32808_rno-mir-216b:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 aatctctgcaggcaactgtgatgtca 42
||||||||||||||| ||||||||||
Sbjct: 21 aatctctgcaggcaaatgtgatgtca 46
>33293_bta-mir-216b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 17 aatctctgcaggcaactgtgatgtca 42
||||||||||||||| ||||||||||
Sbjct: 12 aatctctgcaggcaaatgtgatgtca 37
>26004_gga-mir-216b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 aatctctgcaggcaactgtgatgtc 41
||||||||||||||| |||||||||
Sbjct: 17 aatctctgcaggcaaatgtgatgtc 41
>26005_gga-mir-216c:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 17 aatctctgcaggcaactgtgatgtc 41
||||||||||||||| |||||||||
Sbjct: 71 aatctctgcaggcaaatgtgatgtc 47
>26512_tgu-mir-216b:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 aatctctgcaggcaactgtgatgtc 41
||||||||||||||| |||||||||
Sbjct: 12 aatctctgcaggcaagtgtgatgtc 36
>27306_eca-mir-1461:mirbase
Length = 56
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 18 atctctgcaggcaactgtgatgtca 42
|||||||||||||| ||||||||||
Sbjct: 56 atctctgcaggcaaatgtgatgtca 32
>25529_pma-mir-216b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 aatctctgcaggcaactgtg 36
||||||||||||||||||||
Sbjct: 17 aatctctgcaggcaactgtg 36
