miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25416_pma-mir-1b:mirbase
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Minus
Query: 8 tcccacccagaacccatacttctttacattccacgatcccagctcgcgcacgtggcttta 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 tcccacccagaacccatacttctttacattccacgatcccagctcgcgcacgtggcttta 27
Query: 68 taaagaagtacgtgctctggctggga 93
||||||||||||||||||||||||||
Sbjct: 26 taaagaagtacgtgctctggctggga 1
>34959_isc-mir-1:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 75 ccatacttctttacattcca 56
>34995_dpu-mir-1:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 77 ccatacttctttacattcca 58
>35042_api-mir-1:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 80 ccatacttctttacattcca 61
>35166_aae-mir-1:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 67 ccatacttctttacattcca 48
>35270_aga-mir-1:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 81 ccatacttctttacattcca 62
>35338_ame-mir-1-1:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 71 ccatacttctttacattcca 52
>35339_ame-mir-1-2:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 71 ccatacttctttacattcca 52
>35512_bmo-mir-1a:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 72 ccatacttctttacattcca 53
>35513_bmo-mir-1b:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 11 ccatacttctttacattcca 30
>36003_cqu-mir-1:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 68 ccatacttctttacattcca 49
>36075_dan-mir-1:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 73 ccatacttctttacattcca 54
>36152_der-mir-1:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 73 ccatacttctttacattcca 54
>36235_dgr-mir-1:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 72 ccatacttctttacattcca 53
>36319_dme-mir-1:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 75 ccatacttctttacattcca 56
>36320_dme-mir-1:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 75 ccatacttctttacattcca 56
>36751_dmo-mir-1:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 75 ccatacttctttacattcca 56
>36824_dpe-mir-1:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 72 ccatacttctttacattcca 53
>36899_dps-mir-1:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 72 ccatacttctttacattcca 53
>37111_dse-mir-1:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 73 ccatacttctttacattcca 54
>37190_dsi-mir-1:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 73 ccatacttctttacattcca 54
>37327_dvi-mir-1:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 72 ccatacttctttacattcca 53
>37402_dwi-mir-1:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 74 ccatacttctttacattcca 55
>37480_dya-mir-1:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 74 ccatacttctttacattcca 55
>37569_ngi-mir-1:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 61 ccatacttctttacattcca 42
>37630_nvi-mir-1:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 69 ccatacttctttacattcca 50
>37685_tca-mir-1:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 66 ccatacttctttacattcca 47
>37686_tca-mir-1:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ccatacttctttacattcca 40
||||||||||||||||||||
Sbjct: 66 ccatacttctttacattcca 47
