miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34189_dre-mir-7b:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 18 tgtggaagacttgtgattgtgttgttgt 45
|||||||||||||||||| |||||||||
Sbjct: 21 tgtggaagacttgtgattttgttgttgt 48
>31769_mmu-mir-7b:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 atgtggaagacttgtgattgtgttgtt 43
||||||||||||||||||| |||||||
Sbjct: 27 atgtggaagacttgtgattttgttgtt 53
>32651_rno-mir-7b:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 atgtggaagacttgtgattgtgttgtt 43
||||||||||||||||||| |||||||
Sbjct: 26 atgtggaagacttgtgattttgttgtt 52
>26391_tgu-mir-7-2:mirbase
Length = 73
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 18 tgtggaagacttgtgattgtgttgttgtat 47
||||||||||| |||||| |||||||||||
Sbjct: 9 tgtggaagactagtgattttgttgttgtat 38
>26392_tgu-mir-7-3:mirbase
Length = 73
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 18 tgtggaagacttgtgattgtgttgttgtat 47
||||||||||| |||||| |||||||||||
Sbjct: 9 tgtggaagactagtgattttgttgttgtat 38
>25688_xtr-mir-7-2:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 18 tgtggaagacttgtgattgtgttgttgta 46
||||||||||| |||||| ||||||||||
Sbjct: 20 tgtggaagactagtgattttgttgttgta 48
>38098_bma-mir-7:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 gtggaagacttgtgattgtgttgtt 43
||||||||||||||||| |||||||
Sbjct: 20 gtggaagacttgtgattttgttgtt 44
>25884_gga-mir-7-2:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 20 tggaagacttgtgattgtgttgttgtat 47
||||||||| |||||| |||||||||||
Sbjct: 20 tggaagactagtgattttgttgttgtat 47
>26362_gga-mir-3529:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 20 tggaagacttgtgattgtgttgttgtat 47
||||||||| |||||| |||||||||||
Sbjct: 76 tggaagactagtgattttgttgttgtat 49
>26393_tgu-mir-7-4:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 18 tgtggaagacttgtgattgtgttgttgt 45
||||||||||| |||||| |||||||||
Sbjct: 9 tgtggaagactagtgattttgttgttgt 36
>34186_dre-mir-7a-1:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 18 tgtggaagacttgtgattgtgttgttgt 45
||||||||||| |||||| |||||||||
Sbjct: 1 tgtggaagactagtgattttgttgttgt 28
