miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25443_pma-mir-23b:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 aaaaatcacattgccagggattacc 70
|||||||||||||||||||||||||
Sbjct: 50 aaaaatcacattgccagggattacc 74
>34227_dre-mir-23b:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 aaaaatcacattgccagggattacc 70
|||||||||||||||||||||||||
Sbjct: 47 aaaaatcacattgccagggattacc 71
>25715_xtr-mir-23b:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 50 aaaatcacattgccagggattacc 73
>25907_gga-mir-23b:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 49 aaaatcacattgccagggattacc 72
>26412_tgu-mir-23:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 38 aaaatcacattgccagggattacc 61
>26960_eca-mir-23b:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 43 aaaatcacattgccagggattacc 66
>27344_mdo-mir-23b:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 43 aaaatcacattgccagggattacc 66
>27666_mml-mir-23b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 55 aaaatcacattgccagggattacc 78
>28375_hsa-mir-23b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 55 aaaatcacattgccagggattacc 78
>30055_ppa-mir-23b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 55 aaaatcacattgccagggattacc 78
>30162_ptr-mir-23b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 55 aaaatcacattgccagggattacc 78
>30767_ppy-mir-23b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 55 aaaatcacattgccagggattacc 78
>31790_mmu-mir-23b:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 43 aaaatcacattgccagggattacc 66
>32674_rno-mir-23b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 55 aaaatcacattgccagggattacc 78
>33145_bta-mir-23b:mirbase
Length = 60
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 35 aaaatcacattgccagggattacc 58
>33146_bta-mir-23b:mirbase
Length = 60
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 35 aaaatcacattgccagggattacc 58
>33927_ssc-mir-23b:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 47 aaaatcacattgccagggattacc 70
>34557_fru-mir-23a-1:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 acaaaaatcacattgccagggatt 67
||||||||||||||||||||||||
Sbjct: 50 acaaaaatcacattgccagggatt 73
>34560_fru-mir-23b:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 42 aaaatcacattgccagggattacc 65
>34705_tni-mir-23a-1:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 acaaaaatcacattgccagggatt 67
||||||||||||||||||||||||
Sbjct: 50 acaaaaatcacattgccagggatt 73
>34708_tni-mir-23b:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggattacc 70
||||||||||||||||||||||||
Sbjct: 42 aaaatcacattgccagggattacc 65
>26638_cfa-mir-23b:mirbase
Length = 54
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggatta 68
||||||||||||||||||||||
Sbjct: 33 aaaatcacattgccagggatta 54
>25714_xtr-mir-23a-2:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggatt 67
|||||||||||||||||||||
Sbjct: 49 aaaatcacattgccagggatt 69
>31440_oan-mir-23a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggatt 67
|||||||||||||||||||||
Sbjct: 50 aaaatcacattgccagggatt 70
>31441_oan-mir-23b:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 aaaaatcacattgccagggat 66
|||||||||||||||||||||
Sbjct: 59 aaaaatcacattgccagggat 79
>34224_dre-mir-23a-1:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggatt 67
|||||||||||||||||||||
Sbjct: 53 aaaatcacattgccagggatt 73
>34226_dre-mir-23a-3:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 aaaatcacattgccagggatt 67
|||||||||||||||||||||
Sbjct: 45 aaaatcacattgccagggatt 65
>25659_xla-mir-23a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 49 aaatcacattgccagggatt 68
>25713_xtr-mir-23a-1:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 49 aaatcacattgccagggatt 68
>26637_cfa-mir-23a:mirbase
Length = 52
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 32 aaatcacattgccagggatt 51
>26959_eca-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>27343_mdo-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 40 aaatcacattgccagggatt 59
>27490_age-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>27598_sla-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>27665_mml-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>28182_mne-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>28269_ggo-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>28374_hsa-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>30054_ppa-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>30161_ptr-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>30766_ppy-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>31403_lca-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>31789_mmu-mir-23a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 44 aaatcacattgccagggatt 63
>32673_rno-mir-23a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 44 aaatcacattgccagggatt 63
>33144_bta-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>33926_ssc-mir-23a:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 40 aaatcacattgccagggatt 59
>34558_fru-mir-23a-2:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 46 aaatcacattgccagggatt 65
>34706_tni-mir-23a-2:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 aaatcacattgccagggatt 67
||||||||||||||||||||
Sbjct: 46 aaatcacattgccagggatt 65
>34225_dre-mir-23a-2:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 aatcacattgccagggatt 67
|||||||||||||||||||
Sbjct: 56 aatcacattgccagggatt 74
>34559_fru-mir-23a-3:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 aatcacattgccagggatt 67
|||||||||||||||||||
Sbjct: 52 aatcacattgccagggatt 70
>34707_tni-mir-23a-3:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 aatcacattgccagggatt 67
|||||||||||||||||||
Sbjct: 53 aatcacattgccagggatt 71
