miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34227_dre-mir-23b:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 50 aaaaatcacattgccagggattaccac 76
|||||||||||||||||||||||||||
Sbjct: 47 aaaaatcacattgccagggattaccac 73
>25715_xtr-mir-23b:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 50 aaaatcacattgccagggattaccac 75
>25907_gga-mir-23b:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 49 aaaatcacattgccagggattaccac 74
>26412_tgu-mir-23:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 38 aaaatcacattgccagggattaccac 63
>26960_eca-mir-23b:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 43 aaaatcacattgccagggattaccac 68
>27344_mdo-mir-23b:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 43 aaaatcacattgccagggattaccac 68
>27666_mml-mir-23b:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 55 aaaatcacattgccagggattaccac 80
>28375_hsa-mir-23b:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 55 aaaatcacattgccagggattaccac 80
>30055_ppa-mir-23b:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 55 aaaatcacattgccagggattaccac 80
>30162_ptr-mir-23b:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 55 aaaatcacattgccagggattaccac 80
>30767_ppy-mir-23b:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 55 aaaatcacattgccagggattaccac 80
>31790_mmu-mir-23b:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 43 aaaatcacattgccagggattaccac 68
>32674_rno-mir-23b:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 55 aaaatcacattgccagggattaccac 80
>33145_bta-mir-23b:mirbase
Length = 60
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 35 aaaatcacattgccagggattaccac 60
>33146_bta-mir-23b:mirbase
Length = 60
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 35 aaaatcacattgccagggattaccac 60
>33927_ssc-mir-23b:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 47 aaaatcacattgccagggattaccac 72
>34560_fru-mir-23b:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 42 aaaatcacattgccagggattaccac 67
>34708_tni-mir-23b:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccac 76
||||||||||||||||||||||||||
Sbjct: 42 aaaatcacattgccagggattaccac 67
>25442_pma-mir-23a:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 50 aaaaatcacattgccagggattacc 74
|||||||||||||||||||||||||
Sbjct: 46 aaaaatcacattgccagggattacc 70
>31441_oan-mir-23b:mirbase
Length = 109
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 48 agaaaaatcacattgccagggattaccac 76
||||||||||||||||||||||| |||||
Sbjct: 57 agaaaaatcacattgccagggataaccac 85
>34224_dre-mir-23a-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggattaccact 77
||||||||||||||||||||| |||||
Sbjct: 53 aaaatcacattgccagggatttccact 79
>34557_fru-mir-23a-1:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 aaaaatcacattgccagggattaccac 76
|||||||||||||||||||||| ||||
Sbjct: 52 aaaaatcacattgccagggatttccac 78
>34705_tni-mir-23a-1:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 aaaaatcacattgccagggattaccac 76
|||||||||||||||||||||| ||||
Sbjct: 52 aaaaatcacattgccagggatttccac 78
>26638_cfa-mir-23b:mirbase
Length = 54
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggatta 72
||||||||||||||||||||||
Sbjct: 33 aaaatcacattgccagggatta 54
>25714_xtr-mir-23a-2:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggatt 71
|||||||||||||||||||||
Sbjct: 49 aaaatcacattgccagggatt 69
>31440_oan-mir-23a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggatt 71
|||||||||||||||||||||
Sbjct: 50 aaaatcacattgccagggatt 70
>34226_dre-mir-23a-3:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 aaaatcacattgccagggatt 71
|||||||||||||||||||||
Sbjct: 45 aaaatcacattgccagggatt 65
>25659_xla-mir-23a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 49 aaatcacattgccagggatt 68
>25713_xtr-mir-23a-1:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 49 aaatcacattgccagggatt 68
>26637_cfa-mir-23a:mirbase
Length = 52
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 32 aaatcacattgccagggatt 51
>26959_eca-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>27343_mdo-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 40 aaatcacattgccagggatt 59
>27490_age-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>27598_sla-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>27665_mml-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>28182_mne-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>28269_ggo-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>28374_hsa-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>30054_ppa-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>30161_ptr-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>30766_ppy-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>31403_lca-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>31789_mmu-mir-23a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 44 aaatcacattgccagggatt 63
>32673_rno-mir-23a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 44 aaatcacattgccagggatt 63
>33144_bta-mir-23a:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 43 aaatcacattgccagggatt 62
>33926_ssc-mir-23a:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 40 aaatcacattgccagggatt 59
>34225_dre-mir-23a-2:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 53 aatcacattgccagggattaccactggc 80
||||||||||||||||||| ||| ||||
Sbjct: 56 aatcacattgccagggatttccaatggc 83
>34558_fru-mir-23a-2:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 46 aaatcacattgccagggatt 65
>34559_fru-mir-23a-3:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 53 aatcacattgccagggattaccactggc 80
||||||||||||||||||| ||| ||||
Sbjct: 52 aatcacattgccagggatttccaatggc 79
>34706_tni-mir-23a-2:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aaatcacattgccagggatt 71
||||||||||||||||||||
Sbjct: 46 aaatcacattgccagggatt 65
>34707_tni-mir-23a-3:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 53 aatcacattgccagggattaccactggc 80
||||||||||||||||||| ||| ||||
Sbjct: 53 aatcacattgccagggatttccaatggc 80
